RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 RBPMSQ93062 196 aaKnown RBP12.49□□□□□ -0.41
VCAN-211ENST00000513984 ZNF471Q9BX82 626 aaPredicted RBP12.49□□□□□ -0.41
VCAN-211ENST00000513984 ZFP57Q9NU63 452 aa12.49□□□□□ -0.41
VCAN-211ENST00000513984 ANKRD34BA5PLL1 514 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 C17orf100A8MU93 164 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 K7EPK0 472 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 CCL21O00585 134 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 TNFSF12O43508 249 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 FOXRED2Q8IWF2 684 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 FAM71E2Q8N5Q1 922 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 TPRX1Q8N7U7 411 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 OR52M1Q8NGK5 317 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 OR4D5Q8NGN0 318 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 STOML3Q8TAV4 291 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 PHYHIPLQ96FC7 376 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 SPIN2AQ99865 258 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 SPIN2BQ9BPZ2 258 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 ESRP2Q9H6T0 727 aaKnown RBP12.48□□□□□ -0.41
VCAN-211ENST00000513984 NCOR2Q9Y618 2525 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 ARFGEF3Q5TH69 2177 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 ATRXP46100 2492 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 PIGBOS1A0A0B4J2F0 54 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 CLEC18AA5D8T8 446 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 SHISA9B4DS77 424 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 F5H0A9 414 aaPredicted RBP12.48□□□□□ -0.41
VCAN-211ENST00000513984 C15orf65H3BRN8 121 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 K7N7A8 449 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 SFTPCP11686 197 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 CD80P33681 288 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 NMSQ5H8A3 153 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 DMRTC2Q8IXT2 367 aaPredicted RBP12.48□□□□□ -0.41
VCAN-211ENST00000513984 CLEC18CQ8NCF0 446 aa12.48□□□□□ -0.41
VCAN-211ENST00000513984 PCNPQ8WW12 178 aaKnown RBP12.48□□□□□ -0.41
VCAN-211ENST00000513984 LSM5Q9Y4Y9 91 aaKnown RBP12.48□□□□□ -0.41
VCAN-211ENST00000513984 RBM7Q9Y580 266 aaKnown RBP12.48□□□□□ -0.41
VCAN-211ENST00000513984 USF3Q68DE3 2245 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 ODAMA1E959 279 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 NKX2-6A6NCS4 301 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 LEUTXA8MZ59 168 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 SCGB1D2O95969 90 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 ROS1P08922 2347 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 NMBP08949 121 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 OR8U9P0C7N5 309 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 HKR1P10072 659 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 TNFRSF1AP19438 455 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 VDAC1P21796 283 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 SSTR5P35346 364 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 EDDM3AQ14507 147 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 CR1LQ2VPA4 569 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 STUMQ69YW2 141 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 ZNF561Q8N587 486 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 DRAM1Q8N682 238 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 OR8U1Q8NH10 309 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 OR51H1Q8NH63 302 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 RNASE6Q93091 150 aaKnown RBP12.47□□□□□ -0.41
VCAN-211ENST00000513984 SDSLQ96GA7 329 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 NCOR1P1Q9H4R4 102 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 CYTL1Q9NRR1 136 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 KCNS2Q9ULS6 477 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 PPP1R3CQ9UQK1 317 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 ZZEF1O43149 2961 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 CHD8Q9HCK8 2581 aa12.47□□□□□ -0.41
VCAN-211ENST00000513984 VSTM5A8MXK1 200 aa12.46□□□□□ -0.41
VCAN-211ENST00000513984 E5RGE8 158 aa12.46□□□□□ -0.41
VCAN-211ENST00000513984 HTD2P86397 168 aa12.46□□□□□ -0.41
VCAN-211ENST00000513984 GNMTQ14749 295 aa12.46□□□□□ -0.41
VCAN-211ENST00000513984 MSMO1Q15800 293 aa12.46□□□□□ -0.41
VCAN-211ENST00000513984 FAM201AQ5SY85 155 aa12.46□□□□□ -0.41
VCAN-211ENST00000513984 ZNF645Q8N7E2 425 aa12.46□□□□□ -0.41
VCAN-211ENST00000513984 ZBTB34Q8NCN2 500 aa12.46□□□□□ -0.41
VCAN-211ENST00000513984 OR52L2PQ8NGH6 319 aa12.46□□□□□ -0.41
VCAN-211ENST00000513984 NINJ1Q92982 152 aa12.46□□□□□ -0.41
VCAN-211ENST00000513984 ARL11Q969Q4 196 aa12.46□□□□□ -0.41
VCAN-211ENST00000513984 PLEKHA2Q9HB19 425 aa12.46□□□□□ -0.41
VCAN-211ENST00000513984 NSG2Q9Y328 171 aa12.46□□□□□ -0.41
VCAN-211ENST00000513984 POMT1Q9Y6A1 747 aa12.46□□□□□ -0.41
VCAN-211ENST00000513984 FAM90A27PA6NNH2 459 aa12.46□□□□□ -0.42
VCAN-211ENST00000513984 ST8SIA3O43173 380 aa12.46□□□□□ -0.42
VCAN-211ENST00000513984 SPINT2O43291 252 aa12.46□□□□□ -0.42
VCAN-211ENST00000513984 CYB5R3P00387 301 aaPredicted RBP12.46□□□□□ -0.42
VCAN-211ENST00000513984 GZMHP20718 246 aa12.46□□□□□ -0.42
VCAN-211ENST00000513984 P2RX3P56373 397 aa12.46□□□□□ -0.42
VCAN-211ENST00000513984 ADORA2A-AS1P86434 159 aa12.46□□□□□ -0.42
VCAN-211ENST00000513984 FAM209AQ5JX71 171 aa12.46□□□□□ -0.42
VCAN-211ENST00000513984 TEX36Q5VZQ5 186 aa12.46□□□□□ -0.42
VCAN-211ENST00000513984 ZNRF1Q8ND25 227 aa12.46□□□□□ -0.42
VCAN-211ENST00000513984 PLPPR2Q96GM1 343 aa12.46□□□□□ -0.42
VCAN-211ENST00000513984 ABHD14BQ96IU4 210 aa12.46□□□□□ -0.42
VCAN-211ENST00000513984 CITED4Q96RK1 184 aa12.46□□□□□ -0.42
VCAN-211ENST00000513984 LIN7CQ9NUP9 197 aaKnown RBP12.46□□□□□ -0.42
VCAN-211ENST00000513984 COQ3Q9NZJ6 369 aa12.46□□□□□ -0.42
VCAN-211ENST00000513984 DIDO1Q9BTC0 2240 aaKnown RBP12.45□□□□□ -0.42
VCAN-211ENST00000513984 TAAR5O14804 337 aa12.45□□□□□ -0.42
VCAN-211ENST00000513984 ADAM20O43506 726 aa12.45□□□□□ -0.42
VCAN-211ENST00000513984 SERPINE2P07093 398 aa12.45□□□□□ -0.42
VCAN-211ENST00000513984 RRASP10301 218 aa12.45□□□□□ -0.42
VCAN-211ENST00000513984 IRF2P14316 349 aa12.45□□□□□ -0.42
VCAN-211ENST00000513984 MUC1P15941 1255 aaPredicted RBP12.45□□□□□ -0.42
VCAN-211ENST00000513984 RPL12P30050 165 aaKnown RBP12.45□□□□□ -0.42
VCAN-211ENST00000513984 CCL8P80075 99 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms