RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 QSER1Q2KHR3 1735 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 FAM3BP58499 235 aaPredicted RBP10.84□□□□□ -0.67
COL11A1-210ENST00000512756 AESQ08117 197 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 FDX2Q6P4F2 183 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 TMEM116Q8NCL8 245 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 SLC25A38Q96DW6 304 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 SF3B6Q9Y3B4 125 aaKnown RBP10.84□□□□□ -0.67
COL11A1-210ENST00000512756 ARFGEF1Q9Y6D6 1849 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 TTTY12Q9BZ98 90 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 TMEM222Q9H0R3 208 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 TUBD1Q9UJT1 453 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 WASHC3Q9Y3C0 194 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 ADAMTSL1Q8N6G6 1762 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 DNASE2O00115 360 aaPredicted RBP10.84□□□□□ -0.67
COL11A1-210ENST00000512756 RCC1P18754 421 aaPredicted RBP10.84□□□□□ -0.67
COL11A1-210ENST00000512756 CD1BP29016 333 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 ZNF660Q6AZW8 331 aaPredicted RBP10.84□□□□□ -0.67
COL11A1-210ENST00000512756 OR2J1Q9GZK6 312 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 NPVFQ9HCQ7 196 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 NPDC1Q9NQX5 325 aaPredicted RBP10.84□□□□□ -0.67
COL11A1-210ENST00000512756 WIPI2Q9Y4P8 454 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 PRSS53Q2L4Q9 553 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 ZNF788Q6ZQV5 615 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 AQP3Q92482 292 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 MIOXQ9UGB7 285 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 IL19Q9UHD0 177 aa10.84□□□□□ -0.67
COL11A1-210ENST00000512756 TRAV39A0A0B4J263 110 aa10.83□□□□□ -0.67
COL11A1-210ENST00000512756 FAM157AC9JC47 383 aa10.83□□□□□ -0.67
COL11A1-210ENST00000512756 MGST3O14880 152 aa10.83□□□□□ -0.67
COL11A1-210ENST00000512756 RAB29O14966 203 aa10.83□□□□□ -0.67
COL11A1-210ENST00000512756 SPINK2P20155 84 aa10.83□□□□□ -0.67
COL11A1-210ENST00000512756 COA4Q9NYJ1 87 aa10.83□□□□□ -0.67
COL11A1-210ENST00000512756 OR5AC2Q9NZP5 309 aa10.83□□□□□ -0.67
COL11A1-210ENST00000512756 NAGKQ9UJ70 344 aa10.83□□□□□ -0.67
COL11A1-210ENST00000512756 LY75O60449 1722 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 SNURFLB1AK76 121 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 CSN3P07498 182 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 MUC1P15941 1255 aaPredicted RBP10.83□□□□□ -0.68
COL11A1-210ENST00000512756 PRDX2P32119 198 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 PKIAP61925 76 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 MRPL54Q6P161 138 aaKnown RBP10.83□□□□□ -0.68
COL11A1-210ENST00000512756 ASCL3Q9NQ33 180 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 SPAG17Q6Q759 2223 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 DHRS7CA6NNS2 312 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 SMIM10L1P0DMW3 83 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 PPP1CCP36873 323 aaKnown RBP10.83□□□□□ -0.68
COL11A1-210ENST00000512756 NSUN5P2Q63ZY6 315 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 SMIM10Q96HG1 83 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 OR2V2Q96R30 315 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 AMELYQ99218 206 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 M0R296 226 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 OR8I2Q8N0Y5 310 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 SLC22A18ASQ8N1D0 253 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 OR5R1Q8NH85 324 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 RGP1Q92546 391 aaPredicted RBP10.83□□□□□ -0.68
COL11A1-210ENST00000512756 HSF4Q9ULV5 492 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 SEC16AO15027 2179 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 UBR3Q6ZT12 1888 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 C16orf97H3BN30 126 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 MESP2Q0VG99 397 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 LYPD8Q6UX82 237 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 OR1K1Q8NGR3 316 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 CLN8Q9UBY8 286 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 HSPB8Q9UJY1 196 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 OR51B2Q9Y5P1 312 aa10.83□□□□□ -0.68
COL11A1-210ENST00000512756 F2RL2O00254 374 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 CYB5R3P00387 301 aaPredicted RBP10.82□□□□□ -0.68
COL11A1-210ENST00000512756 HSPB1P04792 205 aaKnown RBP10.82□□□□□ -0.68
COL11A1-210ENST00000512756 PRF1P14222 555 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 IL11P20809 199 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 IER3P46695 156 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 PPOXP50336 477 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 ZNF343Q6P1L6 599 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 DHRS11Q6UWP2 260 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 SFTPA2Q8IWL1 248 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 STARD4Q96DR4 205 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 MIA3Q5JRA6 1907 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 CORTO00230 105 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 APCSP02743 223 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 COL10A1Q03692 680 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 WDFY1Q8IWB7 410 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 AQP10Q96PS8 301 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 DIRC2Q96SL1 478 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 UFC1Q9Y3C8 167 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 SCN3AQ9NY46 2000 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 MFSD2BA6NFX1 497 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 P2RY4P51582 365 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 P2RY6Q15077 328 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 CTHRC1Q96CG8 243 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 WFDC6Q9BQY6 131 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 CLEC5AQ9NY25 188 aa10.82□□□□□ -0.68
COL11A1-210ENST00000512756 IGHV1-45A0A0A0MS14 117 aa10.81□□□□□ -0.68
COL11A1-210ENST00000512756 ZNF98A6NK75 572 aa10.81□□□□□ -0.68
COL11A1-210ENST00000512756 CDX4O14627 284 aaPredicted RBP10.81□□□□□ -0.68
COL11A1-210ENST00000512756 MELTFP08582 738 aa10.81□□□□□ -0.68
COL11A1-210ENST00000512756 FHL5Q5TD97 284 aa10.81□□□□□ -0.68
COL11A1-210ENST00000512756 CYB561D1Q8N8Q1 229 aa10.81□□□□□ -0.68
COL11A1-210ENST00000512756 ZNF71Q9NQZ8 489 aaPredicted RBP10.81□□□□□ -0.68
COL11A1-210ENST00000512756 SRP14P37108 136 aaKnown RBP10.81□□□□□ -0.68
COL11A1-210ENST00000512756 HERVK_113P61574 105 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms