RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 CCT6AP40227 531 aaKnown RBP0.07□□□□□ -2.4
PDGFC-208ENST00000512711 GCLMP48507 274 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 SULT1A2P50226 295 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 BCAP31P51572 246 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 PSMC5P62195 406 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 DYNLL1P63167 89 aaKnown RBP0.07□□□□□ -2.4
PDGFC-208ENST00000512711 HBG1P69891 147 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 HBG2P69892 147 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 BEX3Q00994 111 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 EMX1Q04741 257 aaPredicted RBP0.07□□□□□ -2.4
PDGFC-208ENST00000512711 GLO1Q04760 184 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 PRDX1Q06830 199 aaKnown RBP0.07□□□□□ -2.4
PDGFC-208ENST00000512711 PDK2Q15119 407 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 PDGFRLQ15198 375 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 SLC36A2Q495M3 483 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 MRPL51Q4U2R6 128 aaKnown RBP0.07□□□□□ -2.4
PDGFC-208ENST00000512711 HES3Q5TGS1 186 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 RESP18Q5W5W9 173 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 EBLN2Q6P2I7 272 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 CLEC2AQ6UVW9 174 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 DGAT2L6Q6ZPD8 337 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 CLEC20AQ6ZU45 233 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 SLC35E3Q7Z769 313 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 ZBTB8OSQ8IWT0 167 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 OR8G5Q8NG78 346 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 OR5J2Q8NH18 312 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 GPX8Q8TED1 209 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 CYGBQ8WWM9 190 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 CDKL2Q92772 493 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 ZNF396Q96N95 335 aaPredicted RBP0.07□□□□□ -2.4
PDGFC-208ENST00000512711 PITX2Q99697 317 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 COPS4Q9BT78 406 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 FAAP24Q9BTP7 215 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 MND1Q9BWT6 205 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 CDCA4Q9BXL8 241 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 CST9LQ9H4G1 147 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 SDHAF2Q9NX18 166 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 SCML1Q9UN30 329 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 RRP15Q9Y3B9 282 aaKnown RBP0.07□□□□□ -2.4
PDGFC-208ENST00000512711 FIS1Q9Y3D6 152 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 RHBDD3Q9Y3P4 386 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 ALG5Q9Y673 324 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 MTCH2Q9Y6C9 303 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 SLX4Q8IY92 1834 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 DSCAML1Q8TD84 2053 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 ZNF532Q9HCE3 1301 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 TTC28Q96AY4 2481 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 CACNA1EQ15878 2313 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 ZFC3H1O60293 1989 aaKnown RBP0.06□□□□□ -2.4
PDGFC-208ENST00000512711 FAT4Q6V0I7 4981 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 EPPK1P58107 5090 aaKnown RBP0.06□□□□□ -2.4
PDGFC-208ENST00000512711 RYR3Q15413 4870 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.06□□□□□ -2.4
PDGFC-208ENST00000512711 TRAV8-2A0A0B4J237 113 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 TMEM235A6NFC5 223 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 FAM183AA6NL82 134 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 PSMD11O00231 422 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 AKR7A2O43488 359 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 C1QCP02747 245 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 BPGMP07738 259 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 FBP1P09467 338 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 ANXA8P13928 327 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 TUBG1P23258 451 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 AKR1C3P42330 323 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 SERPINB10P48595 397 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 TTPAP49638 278 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 IDH3GP51553 393 aaPredicted RBP0.06□□□□□ -2.4
PDGFC-208ENST00000512711 CTBP2P56545 445 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 RAB38P57729 211 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 ACTBP60709 375 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 ACTG1P63261 375 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 GUSBP1Q15486 140 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 PABPC1L2AQ5JQF8 200 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 ANXA8L1Q5VT79 327 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 FP248Q71RG6 208 aaPredicted RBP0.06□□□□□ -2.4
PDGFC-208ENST00000512711 LHFPL1Q86WI0 220 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 RPS19BP1Q86WX3 136 aaKnown RBP0.06□□□□□ -2.4
PDGFC-208ENST00000512711 ARHGAP18Q8N392 663 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 C15orf53Q8NAA6 179 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 BBOF1Q8ND07 529 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 OR51L1Q8NGJ5 315 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 OR9I1Q8NGQ6 314 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 GLYATL2Q8WU03 294 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 ASB17Q8WXJ9 295 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 KIAA1143Q96AT1 154 aaPredicted RBP0.06□□□□□ -2.4
PDGFC-208ENST00000512711 GALMQ96C23 342 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 SLC35G5Q96KT7 338 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 BIRC8Q96P09 236 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 MIEN1Q9BRT3 115 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 UPK3BQ9BT76 320 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 ADAT1Q9BUB4 502 aaKnown RBP0.06□□□□□ -2.4
PDGFC-208ENST00000512711 ZNF471Q9BX82 626 aaPredicted RBP0.06□□□□□ -2.4
PDGFC-208ENST00000512711 SUCNR1Q9BXA5 334 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 C11orf49Q9H6J7 331 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 METTL17Q9H7H0 456 aaPredicted RBP0.06□□□□□ -2.4
PDGFC-208ENST00000512711 TUBG2Q9NRH3 451 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 SNX12Q9UMY4 172 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 V9GYY9 64 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 NAV3Q8IVL0 2385 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 ARAP3Q8WWN8 1544 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms