RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 KLK15Q9H2R5 256 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 HSPB7Q9UBY9 170 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 ZFP30Q9Y2G7 519 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 HS3ST3B1Q9Y662 390 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 CEACAM18A8MTB9 384 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 INS-IGF2F8WCM5 200 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 INSP01308 110 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 CD96P40200 585 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 CCR6P51684 374 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 KLF9Q13886 244 aaPredicted RBP7.79□□□□□ -1.16
VCAN-208ENST00000512590 WDTC1Q8N5D0 677 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 TMPRSS13Q9BYE2 586 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 LINC00470Q9BZP3 86 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 IGKV6D-21A0A0A0MT36 114 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 KISS1Q15726 138 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 SP5Q6BEB4 398 aaPredicted RBP7.78□□□□□ -1.16
VCAN-208ENST00000512590 ZDHHC24Q6UX98 284 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 TOMM20LQ6UXN7 152 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 TRDCB7Z8K6 153 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 CXCL10P02778 98 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 GIPP09681 153 aaPredicted RBP7.78□□□□□ -1.16
VCAN-208ENST00000512590 CKS2P33552 79 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 RPS20P60866 119 aaKnown RBP7.78□□□□□ -1.16
VCAN-208ENST00000512590 PRSS45Q7RTY3 260 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 CITED2Q99967 270 aaPredicted RBP7.78□□□□□ -1.16
VCAN-208ENST00000512590 C19orf43Q9BQ61 176 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 MCRIP2Q9BUT9 160 aaKnown RBP7.78□□□□□ -1.16
VCAN-208ENST00000512590 TMEM126AQ9H061 195 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 PRDM6Q9NQX0 595 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 LRP12Q9Y561 859 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 PARP4Q9UKK3 1724 aaKnown RBP7.78□□□□□ -1.16
VCAN-208ENST00000512590 IGHV3OR16-13A0A075B7E8 117 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 IGHV3-74A0A0B4J1X5 117 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 ANKRD20A5PA0PJZ0 165 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 J3QT63 122 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 PDCD6O75340 191 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 CST2P09228 141 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 NPBWR2P48146 333 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 PPP1R27Q86WC6 154 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 TMEM251Q8N6I4 163 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 BCL7BQ9BQE9 202 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 LPAR5Q9H1C0 372 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 KLKB1P03952 638 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 CCL3P10147 92 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 CD99P14209 185 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 GPX3P22352 226 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 EFNB2P52799 333 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 GAB4Q2WGN9 574 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 SAXO2Q658L1 398 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 TCF23Q7RTU1 214 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 JPT2Q9H910 190 aa7.78□□□□□ -1.16
VCAN-208ENST00000512590 MAP1LC3B2A6NCE7 125 aa7.77□□□□□ -1.16
VCAN-208ENST00000512590 A6NDN8 102 aa7.77□□□□□ -1.16
VCAN-208ENST00000512590 ARNTLO00327 626 aa7.77□□□□□ -1.16
VCAN-208ENST00000512590 EPPINO95925 133 aa7.77□□□□□ -1.16
VCAN-208ENST00000512590 RNASE4P34096 147 aaKnown RBP7.77□□□□□ -1.16
VCAN-208ENST00000512590 ASIPP42127 132 aa7.77□□□□□ -1.16
VCAN-208ENST00000512590 PDZK1IP1Q13113 114 aa7.77□□□□□ -1.16
VCAN-208ENST00000512590 MRPL58Q14197 206 aaKnown RBP7.77□□□□□ -1.16
VCAN-208ENST00000512590 FCN2Q15485 313 aa7.77□□□□□ -1.16
VCAN-208ENST00000512590 BPIFA4PQ86YQ2 179 aa7.77□□□□□ -1.16
VCAN-208ENST00000512590 MARS2Q96GW9 593 aaKnown RBP7.77□□□□□ -1.16
VCAN-208ENST00000512590 MAP1LC3BQ9GZQ8 125 aa7.77□□□□□ -1.16
VCAN-208ENST00000512590 SDF2L1Q9HCN8 221 aa7.77□□□□□ -1.16
VCAN-208ENST00000512590 TMEM106BQ9NUM4 274 aa7.77□□□□□ -1.16
VCAN-208ENST00000512590 RASL12Q9NYN1 266 aa7.77□□□□□ -1.16
VCAN-208ENST00000512590 ANAPC10Q9UM13 185 aa7.77□□□□□ -1.16
VCAN-208ENST00000512590 IGHV3-49A0A0A0MS15 119 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 TRAV34A0A0B4J273 112 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 RND2P52198 227 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 TIAL1Q01085 375 aaKnown RBP eCLIP7.77□□□□□ -1.17
VCAN-208ENST00000512590 C4orf48Q5BLP8 95 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 FAM57AQ8TBR7 257 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 PLSCR2Q9NRY7 297 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 IDI2-AS1Q9NZ38 188 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 IGHV3-35A0A0C4DH35 117 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 NKX2-6A6NCS4 301 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 ADARB2-AS1A8MUL3 147 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 UPK1BO75841 260 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 SMIM18P0DKX4 95 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 UCP2P55851 309 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 VAX1Q5SQQ9 334 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 ZNF385DQ9H6B1 395 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 WDR54Q9H977 334 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 DRAXINQ8NBI3 349 aaPredicted RBP7.77□□□□□ -1.17
VCAN-208ENST00000512590 OR2H1Q9GZK4 316 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 MAP2P11137 1827 aaKnown RBP7.77□□□□□ -1.17
VCAN-208ENST00000512590 M0R143 59 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 RIPPLY3P57055 190 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 UNC119Q13432 240 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 ELOBQ15370 118 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 SP6Q3SY56 376 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 ATP1A1-AS1Q5TC04 95 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 B3GNT8Q7Z7M8 397 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 RNASE6Q93091 150 aaKnown RBP7.77□□□□□ -1.17
VCAN-208ENST00000512590 TMEM70Q9BUB7 260 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 MAP1LC3AQ9H492 121 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 ZDHHC18Q9NUE0 388 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 DKK4Q9UBT3 224 aa7.77□□□□□ -1.17
VCAN-208ENST00000512590 OPN4Q9UHM6 478 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms