RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	GCDH	Q92947	438 aa	Predicted RBP	6.11	□□□□□ -1.43
NR1I3-231	ENST00000512340	ARL11	Q969Q4	196 aa		6.11	□□□□□ -1.43
NR1I3-231	ENST00000512340	MARC2	Q969Z3	335 aa		6.11	□□□□□ -1.43
NR1I3-231	ENST00000512340	RAB3C	Q96E17	227 aa		6.11	□□□□□ -1.43
NR1I3-231	ENST00000512340	TM2D1	Q9BX74	207 aa		6.11	□□□□□ -1.43
NR1I3-231	ENST00000512340	GPR61	Q9BZJ8	451 aa		6.11	□□□□□ -1.43
NR1I3-231	ENST00000512340	PRDM13	Q9H4Q3	707 aa		6.11	□□□□□ -1.43
NR1I3-231	ENST00000512340	CALY	Q9NYX4	217 aa		6.11	□□□□□ -1.43
NR1I3-231	ENST00000512340	IDI2-AS1	Q9NZ38	188 aa		6.11	□□□□□ -1.43
NR1I3-231	ENST00000512340	RCC2	Q9P258	522 aa	Known RBP	6.11	□□□□□ -1.43
NR1I3-231	ENST00000512340	HSF4	Q9ULV5	492 aa		6.11	□□□□□ -1.43
NR1I3-231	ENST00000512340	PRELID3B	Q9Y3B1	194 aa		6.11	□□□□□ -1.43
NR1I3-231	ENST00000512340	IGHV2-26	A0A0B4J1V2	119 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340		A0A1B0GUS0	222 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340		A0A1W2PP11	408 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340		A0A1W2PRD5	423 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340		A0A1W2PRF3	423 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340		A0A1W2PRM7	423 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	SERPINE3	A8MV23	424 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	OOSP1	A8MZH6	123 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	HAX1	O00165	279 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	FCN3	O75636	299 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	MT-ND4	P03905	459 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	CD3G	P09693	182 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	SDC2	P34741	201 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	GP2	P55259	537 aa	Known RBP	6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	UBA52	P62987	128 aa	Known RBP	6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	PITPNA	Q00169	270 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	FOXL1	Q12952	345 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	LRRC75B	Q2VPJ9	315 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	SAPCD1	Q5SSQ6	148 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	STEAP3	Q658P3	488 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	RUSC1-AS1	Q66K80	236 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	LYPD6	Q86Y78	171 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	LDLRAD3	Q86YD5	345 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	BEND2	Q8NDZ0	799 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	OR10X1	Q8NGY0	326 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	MRGPRD	Q8TDS7	321 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	AP3S1	Q92572	193 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	DYRK2	Q92630	601 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	RPE	Q96AT9	228 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	GALM	Q96C23	342 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	COQ2	Q96H96	371 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	AKR1E2	Q96JD6	320 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	NKX3-1	Q99801	234 aa	Predicted RBP	6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	CMSS1	Q9BQ75	279 aa	Known RBP	6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	ATG5	Q9H1Y0	275 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	OR51E2	Q9H255	320 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	PPIL3	Q9H2H8	161 aa	Known RBP	6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	DPM3	Q9P2X0	92 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	GNG12	Q9UBI6	72 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	DAPK2	Q9UIK4	370 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340	ETV7	Q9Y603	341 aa		6.1	□□□□□ -1.43
NR1I3-231	ENST00000512340		A0A0A6YYH2	397 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340		A0A0U1RQK1	487 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	DNAJC9-AS1	A6NH13	148 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340		A6NJ64	397 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	F2RL2	O00254	374 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	SDCBP	O00560	298 aa	Predicted RBP	6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	HSPA12A	O43301	675 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	HOXA3	O43365	443 aa	Predicted RBP	6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	SCGB1D2	O95969	90 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	DHFR	P00374	187 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	TFAP2A	P05549	437 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	RNASE1	P07998	156 aa	Known RBP	6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	MELTF	P08582	738 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	SMIM18	P0DKX4	95 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	CHAT	P28329	748 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	CD34	P28906	385 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	KIR2DS4	P43632	304 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	IER3	P46695	156 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	VEGFC	P49767	419 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	DLX6	P56179	175 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	SPCS3	P61009	180 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	FLI1	Q01543	452 aa	Predicted RBP	6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	MXD1	Q05195	221 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	KLRD1	Q13241	179 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	MADCAM1	Q13477	382 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	ARFRP1	Q13795	201 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	KIR2DS1	Q14954	304 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	C21orf62-AS1	Q17RA5	79 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	IDNK	Q5T6J7	187 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	PRAMEF5	Q5TYX0	476 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	ZNF626	Q68DY1	528 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	SFXN4	Q6P4A7	337 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	C12orf54	Q6X4T0	127 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	LINC00299	Q6ZSB3	139 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	BCL6B	Q8N143	479 aa	Predicted RBP	6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	FAM89B	Q8N5H3	189 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	OR13A1	Q8NGR1	328 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	OR4K15	Q8NH41	348 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	PLPPR1	Q8TBJ4	325 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	SETD6	Q8TBK2	473 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	LRRC20	Q8TCA0	184 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	CCDC107	Q8WV48	283 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	KCTD12	Q96CX2	325 aa	Known RBP	6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	C1orf147	Q96MC9	270 aa	Predicted RBP	6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	SSX3	Q99909	188 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	LPAR5	Q9H1C0	372 aa		6.09	□□□□□ -1.43
NR1I3-231	ENST00000512340	MEGF9	Q9H1U4	602 aa		6.09	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms