RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 ZNF732B4DXR9 585 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 SULT1B1O43704 296 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 SAP30O75446 220 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 IGHG2P01859 326 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 MAS1P04201 325 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 CD2P06729 351 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 OCMP0CE72 109 aaPredicted RBP7.05□□□□□ -1.28
NUP54-211ENST00000512151 CD37P11049 281 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 SRMP19623 302 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 GALP22466 123 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 RPS19P39019 145 aaKnown RBP7.05□□□□□ -1.28
NUP54-211ENST00000512151 RORCP51449 518 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 IFITM3Q01628 133 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 HSD17B12Q53GQ0 312 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 CXorf66Q5JRM2 361 aaPredicted RBP7.05□□□□□ -1.28
NUP54-211ENST00000512151 SLC35E3Q7Z769 313 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 CCDC190Q86UF4 302 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 NR2C2APQ86WQ0 139 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 ANGPTL5Q86XS5 388 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 DNAAF1Q8NEP3 725 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 OR52N4Q8NGI2 321 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 OR5D14Q8NGL3 314 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 AQP3Q92482 292 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 ST6GALNAC6Q969X2 333 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 RFT1Q96AA3 541 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 C6orf62Q9GZU0 229 aaPredicted RBP7.05□□□□□ -1.28
NUP54-211ENST00000512151 TMEM133Q9H2Q1 129 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 EXOSC4Q9NPD3 245 aaKnown RBP7.05□□□□□ -1.28
NUP54-211ENST00000512151 DNAH17Q9UFH2 4485 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 hCG_2014768A0A024R1R8 64 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 FAM90A18PA6NE21 464 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 FAM90A16PA6NEW6 464 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 FAM90A20PA6NIJ5 464 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 FAM90A9PA6NNJ1 464 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 FAM90A12PA8MX19 464 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 FAM90A5PA8MXJ8 464 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 LY6LH3BQJ8 138 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 MAGEB3O15480 346 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 PFDN1O60925 122 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 UPK1BO75841 260 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 CLEC2LP0C7M8 214 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 FAM90A15PP0C7V4 464 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 FAM90A13PP0C7W8 464 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 FAM90A14PP0C7W9 464 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 FAM90A24PP0C7X0 464 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 RAB3AP20336 220 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 MAPK3P27361 379 aaPredicted RBP7.04□□□□□ -1.28
NUP54-211ENST00000512151 BDKRB2P30411 391 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 FUT6P51993 359 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 FOXE3Q13461 319 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 PNLIPRP3Q17RR3 467 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 TRIM16LQ309B1 348 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 UTF1Q5T230 341 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 FTMTQ8N4E7 242 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 OR1N2Q8NGR9 330 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 PHYHIPQ92561 330 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 ZNF714Q96N38 554 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 HIST1H2AAQ96QV6 131 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 BARHL1Q9BZE3 327 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 HIPK2Q9H2X6 1198 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 GNB4Q9HAV0 340 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 DAPK2Q9UIK4 370 aa7.04□□□□□ -1.28
NUP54-211ENST00000512151 AK6Q9Y3D8 172 aaKnown RBP7.04□□□□□ -1.28
NUP54-211ENST00000512151 DNAH2Q9P225 4427 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 TRAV1-2A0A0B4J238 106 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 IGKV1-12A0A0C4DH73 117 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 SMIM30A4D0T7 59 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 FAM172BPA6NC97 362 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 OR5B21A6NL26 309 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 I3L521 148 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 K7N7A8 449 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 OVOL1O14753 267 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 ZNF737O75373 536 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 ARL6IP5O75915 188 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 BRI3O95415 125 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 IGKV1D-12P01611 117 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 IGLV1-47P01700 117 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 MED14OSP0DP75 135 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 GDNFP39905 211 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 RBP2P50120 134 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 MTCP1P56278 107 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 EDDM3BP56851 147 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 OR10A3P58181 314 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 ZP1P60852 638 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 GNB1P62873 340 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 GNG3P63215 75 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 CFHR3Q02985 330 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 KIAA0141Q14154 515 aaPredicted RBP7.03□□□□□ -1.28
NUP54-211ENST00000512151 KISS1Q15726 138 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 SMIM21Q3B7S5 101 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 TPTE2P1Q5T6R2 138 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 DDI2Q5TDH0 399 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 HAGHLQ6PII5 290 aaPredicted RBP7.03□□□□□ -1.28
NUP54-211ENST00000512151 LYSMD2Q8IV50 215 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 ABHD12Q8N2K0 398 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 TPRX1Q8N7U7 411 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 POC1AQ8NBT0 407 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 OR5D18Q8NGL1 313 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 THRSPQ92748 146 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 DLX4Q92988 240 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms