RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 RAB7AP51149 207 aa13.13□□□□□ -0.31
DDX41-213ENST00000512027 GABARAPL2P60520 117 aa13.13□□□□□ -0.31
DDX41-213ENST00000512027 ZNF816Q0VGE8 651 aaPredicted RBP13.13□□□□□ -0.31
DDX41-213ENST00000512027 RAB11BQ15907 218 aa13.13□□□□□ -0.31
DDX41-213ENST00000512027 HES5Q5TA89 166 aa13.13□□□□□ -0.31
DDX41-213ENST00000512027 C10orf99Q6UWK7 81 aa13.13□□□□□ -0.31
DDX41-213ENST00000512027 MOB3BQ86TA1 216 aa13.13□□□□□ -0.31
DDX41-213ENST00000512027 LINC00311Q8N616 119 aa13.13□□□□□ -0.31
DDX41-213ENST00000512027 AKR1E2Q96JD6 320 aa13.13□□□□□ -0.31
DDX41-213ENST00000512027 HDHD3Q9BSH5 251 aaPredicted RBP13.13□□□□□ -0.31
DDX41-213ENST00000512027 MBNL3Q9NUK0 354 aaKnown RBP13.13□□□□□ -0.31
DDX41-213ENST00000512027 H3BUI4 141 aa13.12□□□□□ -0.31
DDX41-213ENST00000512027 KCNAB3O43448 404 aa13.12□□□□□ -0.31
DDX41-213ENST00000512027 CA11O75493 328 aa13.12□□□□□ -0.31
DDX41-213ENST00000512027 FAM106CPP0CH98 169 aa13.12□□□□□ -0.31
DDX41-213ENST00000512027 TMEM11P17152 192 aa13.12□□□□□ -0.31
DDX41-213ENST00000512027 PPP1CCP36873 323 aaKnown RBP13.12□□□□□ -0.31
DDX41-213ENST00000512027 OR10A3P58181 314 aa13.12□□□□□ -0.31
DDX41-213ENST00000512027 CT45A1Q5HYN5 189 aa13.12□□□□□ -0.31
DDX41-213ENST00000512027 SLC25A48Q6ZT89 311 aaKnown RBP13.12□□□□□ -0.31
DDX41-213ENST00000512027 OR8H3Q8N146 312 aa13.12□□□□□ -0.31
DDX41-213ENST00000512027 DTX3Q8N9I9 347 aa13.12□□□□□ -0.31
DDX41-213ENST00000512027 CT45A3Q8NHU0 189 aa13.12□□□□□ -0.31
DDX41-213ENST00000512027 CITED2Q99967 270 aaPredicted RBP13.12□□□□□ -0.31
DDX41-213ENST00000512027 NDUFB11Q9NX14 153 aa13.12□□□□□ -0.31
DDX41-213ENST00000512027 MOB4Q9Y3A3 225 aa13.12□□□□□ -0.31
DDX41-213ENST00000512027 SMIM30A4D0T7 59 aa13.11□□□□□ -0.31
DDX41-213ENST00000512027 ZNF736B4DX44 427 aaPredicted RBP13.11□□□□□ -0.31
DDX41-213ENST00000512027 WIPF1O43516 503 aa13.11□□□□□ -0.31
DDX41-213ENST00000512027 DENRO43583 198 aaKnown RBP13.11□□□□□ -0.31
DDX41-213ENST00000512027 GAPDHP04406 335 aaKnown RBP13.11□□□□□ -0.31
DDX41-213ENST00000512027 TRAT1Q6PIZ9 186 aa13.11□□□□□ -0.31
DDX41-213ENST00000512027 THNSL2Q86YJ6 484 aa13.11□□□□□ -0.31
DDX41-213ENST00000512027 SPARTQ8N0X7 666 aa13.11□□□□□ -0.31
DDX41-213ENST00000512027 C8orf31Q8N9H6 132 aa13.11□□□□□ -0.31
DDX41-213ENST00000512027 SETD6Q8TBK2 473 aa13.11□□□□□ -0.31
DDX41-213ENST00000512027 RTN4IP1Q8WWV3 396 aaPredicted RBP13.11□□□□□ -0.31
DDX41-213ENST00000512027 ST6GALNAC6Q969X2 333 aa13.11□□□□□ -0.31
DDX41-213ENST00000512027 CHMP1AQ9HD42 196 aaPredicted RBP13.11□□□□□ -0.31
DDX41-213ENST00000512027 OR2S2Q9NQN1 319 aa13.11□□□□□ -0.31
DDX41-213ENST00000512027 KCNIP1Q9NZI2 227 aa13.11□□□□□ -0.31
DDX41-213ENST00000512027 AK3Q9UIJ7 227 aa13.11□□□□□ -0.31
DDX41-213ENST00000512027 V9GY05 133 aa13.11□□□□□ -0.31
DDX41-213ENST00000512027 A0A0B4J203 849 aa13.1□□□□□ -0.31
DDX41-213ENST00000512027 FOXI3A8MTJ6 420 aaPredicted RBP13.1□□□□□ -0.31
DDX41-213ENST00000512027 ADARB2-AS1A8MUL3 147 aa13.1□□□□□ -0.31
DDX41-213ENST00000512027 PSMB9P28065 219 aa13.1□□□□□ -0.31
DDX41-213ENST00000512027 VEGFCP49767 419 aa13.1□□□□□ -0.31
DDX41-213ENST00000512027 HMGN3Q15651 99 aa13.1□□□□□ -0.31
DDX41-213ENST00000512027 C2orf76Q3KRA6 126 aa13.1□□□□□ -0.31
DDX41-213ENST00000512027 MORN2Q502X0 79 aa13.1□□□□□ -0.31
DDX41-213ENST00000512027 C22orf42Q6IC83 251 aa13.1□□□□□ -0.31
DDX41-213ENST00000512027 OR2W3Q7Z3T1 314 aa13.1□□□□□ -0.31
DDX41-213ENST00000512027 C1QL4Q86Z23 238 aa13.1□□□□□ -0.31
DDX41-213ENST00000512027 SVOPQ8N4V2 548 aa13.1□□□□□ -0.31
DDX41-213ENST00000512027 C5orf56Q8N8D9 126 aa13.1□□□□□ -0.31
DDX41-213ENST00000512027 OR5AU1Q8NGC0 362 aa13.1□□□□□ -0.31
DDX41-213ENST00000512027 FAM3DQ96BQ1 224 aa13.1□□□□□ -0.31
DDX41-213ENST00000512027 Q9H521 79 aa13.1□□□□□ -0.31
DDX41-213ENST00000512027 PLEKHJ1Q9NW61 149 aa13.1□□□□□ -0.31
DDX41-213ENST00000512027 RRP15Q9Y3B9 282 aaKnown RBP13.1□□□□□ -0.31
DDX41-213ENST00000512027 TMEM272A0A1B0GTI8 110 aa13.09□□□□□ -0.31
DDX41-213ENST00000512027 A0A1W2PRX2 142 aa13.09□□□□□ -0.31
DDX41-213ENST00000512027 NAPSAO96009 420 aa13.09□□□□□ -0.31
DDX41-213ENST00000512027 IL3RAP26951 378 aa13.09□□□□□ -0.31
DDX41-213ENST00000512027 TMEM50BP56557 158 aa13.09□□□□□ -0.31
DDX41-213ENST00000512027 DEFA6Q01524 100 aa13.09□□□□□ -0.31
DDX41-213ENST00000512027 Q3ZCU0 254 aa13.09□□□□□ -0.31
DDX41-213ENST00000512027 TCTEX1D4Q5JR98 221 aa13.09□□□□□ -0.31
DDX41-213ENST00000512027 UBE2UQ5VVX9 321 aa13.09□□□□□ -0.31
DDX41-213ENST00000512027 CD200R1LQ6Q8B3 271 aa13.09□□□□□ -0.31
DDX41-213ENST00000512027 FAM89BQ8N5H3 189 aa13.09□□□□□ -0.31
DDX41-213ENST00000512027 IL1F10Q8WWZ1 152 aa13.09□□□□□ -0.31
DDX41-213ENST00000512027 ARHGAP5-AS1Q96IT6 56 aa13.09□□□□□ -0.31
DDX41-213ENST00000512027 EAF1Q96JC9 268 aaPredicted RBP13.09□□□□□ -0.31
DDX41-213ENST00000512027 URM1Q9BTM9 101 aaKnown RBP13.09□□□□□ -0.31
DDX41-213ENST00000512027 RAB9BQ9NP90 201 aa13.09□□□□□ -0.31
DDX41-213ENST00000512027 TRDV1A0A1B0GX56 115 aa13.08□□□□□ -0.32
DDX41-213ENST00000512027 LDLRAD4O15165 306 aa13.08□□□□□ -0.32
DDX41-213ENST00000512027 TMEM30BQ3MIR4 351 aa13.08□□□□□ -0.32
DDX41-213ENST00000512027 ZNF880Q6PDB4 577 aa13.08□□□□□ -0.32
DDX41-213ENST00000512027 CENPVQ7Z7K6 275 aaPredicted RBP13.08□□□□□ -0.32
DDX41-213ENST00000512027 NR2C2APQ86WQ0 139 aa13.08□□□□□ -0.32
DDX41-213ENST00000512027 TGIF2LXQ8IUE1 241 aa13.08□□□□□ -0.32
DDX41-213ENST00000512027 IZUMO1Q8IYV9 350 aa13.08□□□□□ -0.32
DDX41-213ENST00000512027 Q8N6K4 173 aa13.08□□□□□ -0.32
DDX41-213ENST00000512027 NOL4LQ96MY1 436 aaPredicted RBP13.08□□□□□ -0.32
DDX41-213ENST00000512027 ABHD14AQ9BUJ0 271 aa13.08□□□□□ -0.32
DDX41-213ENST00000512027 PECRQ9BY49 303 aa13.08□□□□□ -0.32
DDX41-213ENST00000512027 PARP12Q9H0J9 701 aaKnown RBP13.08□□□□□ -0.32
DDX41-213ENST00000512027 STEAP1Q9UHE8 339 aa13.08□□□□□ -0.32
DDX41-213ENST00000512027 LINC00527Q9UJ94 153 aa13.08□□□□□ -0.32
DDX41-213ENST00000512027 JPT1Q9UK76 154 aa13.08□□□□□ -0.32
DDX41-213ENST00000512027 PLXNB1O43157 2135 aa13.07□□□□□ -0.32
DDX41-213ENST00000512027 M0QZK8 103 aa13.07□□□□□ -0.32
DDX41-213ENST00000512027 MRPS14O60783 128 aaKnown RBP13.07□□□□□ -0.32
DDX41-213ENST00000512027 MYL9P24844 172 aa13.07□□□□□ -0.32
DDX41-213ENST00000512027 OR3A3P47888 321 aa13.07□□□□□ -0.32
DDX41-213ENST00000512027 ZNF137PP52743 207 aa13.07□□□□□ -0.32
DDX41-213ENST00000512027 HTD2P86397 168 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms