RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 SNRPCP09234 159 aaKnown RBP4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 SULT1A3P0DMM9 295 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 SULT1A4P0DMN0 295 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 VSIG10L2P0DP72 767 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 IGFBP3P17936 291 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 PSMB1P20618 241 aaKnown RBP4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 PSMB9P28065 219 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 MAP2K3P46734 347 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 FAM53BQ14153 422 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 LGALSLQ3ZCW2 172 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 C1orf189Q5VU69 101 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR10K2Q6IF99 312 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 TRIM40Q6P9F5 258 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 COX8CQ7Z4L0 72 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 LINC01551Q86U37 167 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 DTWD1Q8N5C7 304 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 ACBD7Q8N6N7 88 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 SLC30A7Q8NEW0 376 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR2A1Q8NGT9 310 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR5K1Q8NHB7 308 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 APOBEC3DQ96AK3 386 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 RCN3Q96D15 328 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 LINC00477Q96M19 166 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 RDH12Q96NR8 316 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 GNRHR2Q96P88 292 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR7D2Q96RA2 312 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 SNHG12Q9BXW3 62 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 ULBP3Q9BZM4 244 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 RNF167Q9H6Y7 350 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 PTGES2Q9H7Z7 377 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 C3orf14Q9HBI5 128 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 EXOSC4Q9NPD3 245 aaKnown RBP4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 SPTBP11277 2137 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 A0A0J9YY10 115 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 CDC14CA4D256 554 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 A8MWP6 167 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 F5H5K5 113 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 HOXA3O43365 443 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 PPIHO43447 177 aaKnown RBP4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 TRIAP1O43715 76 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 ICOSLGO75144 302 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 AZU1P20160 251 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 USF1P22415 310 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 EMDP50402 254 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF84P51523 738 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 DCDP81605 110 aaKnown RBP4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 RUNX1Q01196 453 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 HIST3H3Q16695 136 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 LDLRAD2Q5SZI1 272 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 FAM27D1Q5T7N8 215 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 FNDC7Q5VTL7 733 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 GLYATQ6IB77 296 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF343Q6P1L6 599 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 FRRS1Q6ZNA5 592 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 C20orf204Q6ZNR8 217 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 GLCCI1Q86VQ1 547 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 PDZD9Q8IXQ8 264 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 GPR135Q8IZ08 494 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 CMTM4Q8IZR5 234 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 CA13Q8N1Q1 262 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 TMEM86BQ8N661 226 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 GATD1Q8NB37 220 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 UBAC2Q8NBM4 344 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF740Q8NDX6 193 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 STAG3L4Q8TBR4 150 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 ORAOV1Q8WV07 137 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 PPCDCQ96CD2 204 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 C20orf144Q9BQM9 153 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 CABLES2Q9BTV7 478 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 GLIPR2Q9H4G4 154 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 AAMDCQ9H7C9 122 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 ELL3Q9HB65 397 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 CACYBPQ9HB71 228 aaKnown RBP4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 MED29Q9NX70 200 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 IDI2-AS1Q9NZ38 188 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 PLA2G2DQ9UNK4 145 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 KLF12Q9Y4X4 402 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 PTPRBP23467 1997 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 IGKV1-8A0A0C4DH67 115 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 TRAPPC13A5PLN9 417 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 E7EQ34 232 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 NPIPB9F8W1W9 429 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 SPRY3O43610 288 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR7C2O60412 319 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 GALR3O60755 368 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 SCRG1O75711 98 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 IGHG3P01860 377 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 IGHG4P01861 327 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 CMPK1P30085 196 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 MDH2P40926 338 aaKnown RBP4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 BTG1P62324 171 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 GNG5P63218 68 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF763Q0D2J5 394 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 PLCXD2Q0VAA5 305 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 ST3GAL4Q11206 333 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 MFAP5Q13361 173 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 MEF2DQ14814 521 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 OPCMLQ14982 345 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 FCN2Q15485 313 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 LRRC37A5PQ49AS3 106 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms