RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 PPP1CCP36873 323 aaKnown RBP10.57□□□□□ -0.72
RNF4-215ENST00000511843 RAB7AP51149 207 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 EMX1Q04741 257 aaPredicted RBP10.57□□□□□ -0.72
RNF4-215ENST00000511843 PLA2G7Q13093 441 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 TRAM1Q15629 374 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 RAB11BQ15907 218 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 CT45A1Q5HYN5 189 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 C6orf183Q5T699 404 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 HES5Q5TA89 166 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 OR8H3Q8N146 312 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 DTX3Q8N9I9 347 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 OR51D1Q8NGF3 324 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 CT45A3Q8NHU0 189 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 AKR1E2Q96JD6 320 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 HDHD3Q9BSH5 251 aaPredicted RBP10.57□□□□□ -0.72
RNF4-215ENST00000511843 TM2D1Q9BX74 207 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 LPAR5Q9H1C0 372 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 MBNL3Q9NUK0 354 aaKnown RBP10.57□□□□□ -0.72
RNF4-215ENST00000511843 BLOC1S6Q9UL45 172 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 MOB4Q9Y3A3 225 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 ZNF736B4DX44 427 aaPredicted RBP10.56□□□□□ -0.72
RNF4-215ENST00000511843 ARL6IP5O75915 188 aa10.56□□□□□ -0.72
RNF4-215ENST00000511843 GAPDHP04406 335 aaKnown RBP10.56□□□□□ -0.72
RNF4-215ENST00000511843 GLAP06280 429 aa10.56□□□□□ -0.72
RNF4-215ENST00000511843 PSMA1P25786 263 aaKnown RBP10.56□□□□□ -0.72
RNF4-215ENST00000511843 OR10A3P58181 314 aa10.56□□□□□ -0.72
RNF4-215ENST00000511843 ZNF816Q0VGE8 651 aaPredicted RBP10.56□□□□□ -0.72
RNF4-215ENST00000511843 SLC25A48Q6ZT89 311 aaKnown RBP10.56□□□□□ -0.72
RNF4-215ENST00000511843 THNSL2Q86YJ6 484 aa10.56□□□□□ -0.72
RNF4-215ENST00000511843 LINC00311Q8N616 119 aa10.56□□□□□ -0.72
RNF4-215ENST00000511843 OR5AU1Q8NGC0 362 aa10.56□□□□□ -0.72
RNF4-215ENST00000511843 SETD6Q8TBK2 473 aa10.56□□□□□ -0.72
RNF4-215ENST00000511843 RTN4IP1Q8WWV3 396 aaPredicted RBP10.56□□□□□ -0.72
RNF4-215ENST00000511843 ST6GALNAC6Q969X2 333 aa10.56□□□□□ -0.72
RNF4-215ENST00000511843 OR2S2Q9NQN1 319 aa10.56□□□□□ -0.72
RNF4-215ENST00000511843 KCNIP1Q9NZI2 227 aa10.56□□□□□ -0.72
RNF4-215ENST00000511843 SMIM30A4D0T7 59 aa10.55□□□□□ -0.72
RNF4-215ENST00000511843 CA11O75493 328 aa10.55□□□□□ -0.72
RNF4-215ENST00000511843 ARSBP15848 533 aa10.55□□□□□ -0.72
RNF4-215ENST00000511843 GABARAPL2P60520 117 aa10.55□□□□□ -0.72
RNF4-215ENST00000511843 TCTEX1D4Q5JR98 221 aa10.55□□□□□ -0.72
RNF4-215ENST00000511843 TRAT1Q6PIZ9 186 aa10.55□□□□□ -0.72
RNF4-215ENST00000511843 CENPVQ7Z7K6 275 aaPredicted RBP10.55□□□□□ -0.72
RNF4-215ENST00000511843 C5orf56Q8N8D9 126 aa10.55□□□□□ -0.72
RNF4-215ENST00000511843 C8orf31Q8N9H6 132 aa10.55□□□□□ -0.72
RNF4-215ENST00000511843 EAF1Q96JC9 268 aaPredicted RBP10.55□□□□□ -0.72
RNF4-215ENST00000511843 CHMP1AQ9HD42 196 aaPredicted RBP10.55□□□□□ -0.72
RNF4-215ENST00000511843 NDUFB11Q9NX14 153 aa10.55□□□□□ -0.72
RNF4-215ENST00000511843 NOTCH1P46531 2555 aa10.54□□□□□ -0.72
RNF4-215ENST00000511843 A0A0B4J203 849 aa10.54□□□□□ -0.72
RNF4-215ENST00000511843 IL3RAP26951 378 aa10.54□□□□□ -0.72
RNF4-215ENST00000511843 VEGFCP49767 419 aa10.54□□□□□ -0.72
RNF4-215ENST00000511843 HMGN3Q15651 99 aa10.54□□□□□ -0.72
RNF4-215ENST00000511843 MORN2Q502X0 79 aa10.54□□□□□ -0.72
RNF4-215ENST00000511843 C22orf42Q6IC83 251 aa10.54□□□□□ -0.72
RNF4-215ENST00000511843 OR2W3Q7Z3T1 314 aa10.54□□□□□ -0.72
RNF4-215ENST00000511843 TGIF2LXQ8IUE1 241 aa10.54□□□□□ -0.72
RNF4-215ENST00000511843 SPARTQ8N0X7 666 aa10.54□□□□□ -0.72
RNF4-215ENST00000511843 SVOPQ8N4V2 548 aa10.54□□□□□ -0.72
RNF4-215ENST00000511843 IL1F10Q8WWZ1 152 aa10.54□□□□□ -0.72
RNF4-215ENST00000511843 FAM3DQ96BQ1 224 aa10.54□□□□□ -0.72
RNF4-215ENST00000511843 R3HDM4Q96D70 268 aa10.54□□□□□ -0.72
RNF4-215ENST00000511843 NOL4LQ96MY1 436 aaPredicted RBP10.54□□□□□ -0.72
RNF4-215ENST00000511843 PARP12Q9H0J9 701 aaKnown RBP10.54□□□□□ -0.72
RNF4-215ENST00000511843 RAB9BQ9NP90 201 aa10.54□□□□□ -0.72
RNF4-215ENST00000511843 PLEKHJ1Q9NW61 149 aa10.54□□□□□ -0.72
RNF4-215ENST00000511843 AK3Q9UIJ7 227 aa10.54□□□□□ -0.72
RNF4-215ENST00000511843 LINC00527Q9UJ94 153 aa10.54□□□□□ -0.72
RNF4-215ENST00000511843 V9GY05 133 aa10.54□□□□□ -0.72
RNF4-215ENST00000511843 TMEM272A0A1B0GTI8 110 aa10.53□□□□□ -0.72
RNF4-215ENST00000511843 LINC01548A6NM66 108 aa10.53□□□□□ -0.72
RNF4-215ENST00000511843 NCBP2LA6PVI3 153 aaKnown RBP10.53□□□□□ -0.72
RNF4-215ENST00000511843 FOXI3A8MTJ6 420 aaPredicted RBP10.53□□□□□ -0.72
RNF4-215ENST00000511843 M0QZK8 103 aa10.53□□□□□ -0.72
RNF4-215ENST00000511843 DENRO43583 198 aaKnown RBP10.53□□□□□ -0.72
RNF4-215ENST00000511843 NAPSAO96009 420 aa10.53□□□□□ -0.72
RNF4-215ENST00000511843 PSMB9P28065 219 aa10.53□□□□□ -0.72
RNF4-215ENST00000511843 OR3A3P47888 321 aa10.53□□□□□ -0.72
RNF4-215ENST00000511843 C2orf76Q3KRA6 126 aa10.53□□□□□ -0.72
RNF4-215ENST00000511843 KHDC1LQ5JSQ8 128 aa10.53□□□□□ -0.72
RNF4-215ENST00000511843 CD200R1LQ6Q8B3 271 aa10.53□□□□□ -0.72
RNF4-215ENST00000511843 ZNF329Q86UD4 541 aa10.53□□□□□ -0.72
RNF4-215ENST00000511843 NR2C2APQ86WQ0 139 aa10.53□□□□□ -0.72
RNF4-215ENST00000511843 NDUFA11Q86Y39 141 aa10.53□□□□□ -0.72
RNF4-215ENST00000511843 IZUMO1Q8IYV9 350 aa10.53□□□□□ -0.72
RNF4-215ENST00000511843 Q8N6K4 173 aa10.53□□□□□ -0.72
RNF4-215ENST00000511843 ARHGAP5-AS1Q96IT6 56 aa10.53□□□□□ -0.72
RNF4-215ENST00000511843 URM1Q9BTM9 101 aaKnown RBP10.53□□□□□ -0.72
RNF4-215ENST00000511843 ABHD14AQ9BUJ0 271 aa10.53□□□□□ -0.72
RNF4-215ENST00000511843 JPT1Q9UK76 154 aa10.53□□□□□ -0.72
RNF4-215ENST00000511843 TCRBV4S1A1TA0A5B7 111 aa10.52□□□□□ -0.73
RNF4-215ENST00000511843 G3V4G9 280 aa10.52□□□□□ -0.73
RNF4-215ENST00000511843 LDLRAD4O15165 306 aa10.52□□□□□ -0.73
RNF4-215ENST00000511843 OPN1MWP04001 364 aa10.52□□□□□ -0.73
RNF4-215ENST00000511843 OPN1MW2P0DN77 364 aa10.52□□□□□ -0.73
RNF4-215ENST00000511843 OPN1MW3P0DN78 364 aa10.52□□□□□ -0.73
RNF4-215ENST00000511843 ZNF137PP52743 207 aa10.52□□□□□ -0.73
RNF4-215ENST00000511843 TMEM50BP56557 158 aa10.52□□□□□ -0.73
RNF4-215ENST00000511843 CD83Q01151 205 aa10.52□□□□□ -0.73
RNF4-215ENST00000511843 EBI3Q14213 229 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms