RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 RAB29O14966 203 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 ZNF253O75346 499 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 OR2A4O95047 310 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 CD160O95971 181 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 PRDX2P32119 198 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 COL10A1Q03692 680 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 KLF9Q13886 244 aaPredicted RBP5.06□□□□□ -1.6
USP38-203ENST00000511739 IL13RA2Q14627 380 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 ELOBQ15370 118 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 TMEM183BQ1AE95 376 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 COL13A1Q5TAT6 717 aaPredicted RBP5.06□□□□□ -1.6
USP38-203ENST00000511739 PRSS54Q6PEW0 395 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 ARL6IP6Q8N6S5 226 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 OR2A7Q96R45 310 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 CDCA4Q9BXL8 241 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 SPNS1Q9H2V7 528 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 DUSP21Q9H596 190 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 GEMIN7Q9H840 131 aaKnown RBP5.06□□□□□ -1.6
USP38-203ENST00000511739 ZNF275Q9NSD4 429 aaPredicted RBP5.06□□□□□ -1.6
USP38-203ENST00000511739 DUXBA0A1W2PPF3 345 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 TMEM189A5PLL7 270 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 SLC25A17O43808 307 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 CDX1P47902 265 aaPredicted RBP5.05□□□□□ -1.6
USP38-203ENST00000511739 ARF6P62330 175 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 TMEM251Q8N6I4 163 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 LRRC75AQ8NAA5 344 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 OR2D3Q8NGH3 330 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 AQP10Q96PS8 301 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 OR2H1Q9GZK4 316 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 MANBALQ9NQG1 85 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 DNAJB12Q9NXW2 375 aaKnown RBP5.05□□□□□ -1.6
USP38-203ENST00000511739 HSPB8Q9UJY1 196 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 A0A1W2PRX2 142 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 PRR33A8MZF0 331 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 SFT2D2O95562 160 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 IGKV3-20P01619 116 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 LSM6P62312 80 aaKnown RBP5.05□□□□□ -1.6
USP38-203ENST00000511739 ASAH1Q13510 395 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 KIAA0040Q15053 153 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 DEFB121Q5J5C9 76 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 PMS2CLQ68D20 193 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 C8orf82Q6P1X6 216 aaPredicted RBP5.05□□□□□ -1.6
USP38-203ENST00000511739 FAM214BQ7L5A3 538 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 OR10G8Q8NGN5 311 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 YIPF6Q96EC8 236 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 TMEM101Q96IK0 257 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 TBX15Q96SF7 602 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 SLC17A5Q9NRA2 495 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 CACNA1CQ13936 2221 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 KCNE1BA0A087WTH5 132 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 PPIAL4CA0A0B4J2A2 164 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 TMEM272A0A1B0GTI8 110 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 NPFFO15130 113 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 C1QBP02746 253 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 CISD3P0C7P0 127 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 PPIAL4GP0DN37 164 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 CSRP3P50461 194 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 MMP15P51511 669 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 STARD6P59095 220 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 RPS4XP62701 263 aaKnown RBP5.05□□□□□ -1.6
USP38-203ENST00000511739 IL24Q13007 206 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 COX19Q49B96 90 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 C11orf87Q6NUJ2 197 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 ITLN2Q8WWU7 325 aaPredicted RBP5.05□□□□□ -1.6
USP38-203ENST00000511739 POM121Q96HA1 1249 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 OR2V2Q96R30 315 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 RNF167Q9H6Y7 350 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 RNF122Q9H9V4 155 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 STARD10Q9Y365 291 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 LOC389332A0A1B0GUA5 103 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 PLAUP00749 431 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 VSIG10L2P0DP72 767 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 EMP1P54849 157 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 B2MP61769 119 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 SUMO2P61956 95 aaKnown RBP5.05□□□□□ -1.6
USP38-203ENST00000511739 SLC25A35Q3KQZ1 300 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 BVESQ8NE79 360 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 OR8B12Q8NGG6 310 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 ATG101Q9BSB4 218 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 WDR54Q9H977 334 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 FGF20Q9NP95 211 aaPredicted RBP5.05□□□□□ -1.6
USP38-203ENST00000511739 FOXD3Q9UJU5 478 aaPredicted RBP5.05□□□□□ -1.6
USP38-203ENST00000511739 SIGLEC7Q9Y286 467 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 OTOFQ9HC10 1997 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 ANK1P16157 1881 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 MYO16Q9Y6X6 1858 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 ZSWIM8A7E2V4 1837 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 PSMB11A5LHX3 300 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 ISLRO14498 428 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 CA11O75493 328 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 GPX1P07203 203 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 RD3LP0DJH9 198 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 EVX1P49640 407 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 GABRA6Q16445 453 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 LINC00303Q3SY05 128 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 TEPPQ6URK8 271 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 SLC16A13Q7RTY0 426 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 SMRP1Q8NCR6 262 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 ASB10Q8WXI3 467 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 SIRT7Q9NRC8 400 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms