RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 LCTP09848 1927 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 KIAA0232Q92628 1395 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 TRPC5OSA6NMA1 111 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 C9J4A7 227 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 F5H5K5 113 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 SMLR1H3BR10 107 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 NQO1P15559 274 aaKnown RBP1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 ORM2P19652 201 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 DLX6P56179 175 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 ACTBP60709 375 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 ACTG1P63261 375 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 FAM3AP98173 230 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 C1DQ13901 141 aaKnown RBP1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 TRMT12Q53H54 448 aaKnown RBP1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 CCDC121Q6ZUS5 278 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 VN1R4Q7Z5H5 301 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 MTERF4Q7Z6M4 381 aaKnown RBP1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 SLC13A5Q86YT5 568 aaPredicted RBP1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 OR5AK3PQ8NH89 298 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 OR5K1Q8NHB7 308 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 SUN5Q8TC36 379 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 LRRC45Q96CN5 670 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 ACBD6Q9BR61 282 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 MED18Q9BUE0 208 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 UGT2B28Q9BY64 529 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 NDEL1Q9GZM8 345 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 GTSF1LQ9H1H1 148 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 CHMP4BQ9H444 224 aaKnown RBP1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 MS4A12Q9NXJ0 267 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 FIS1Q9Y3D6 152 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 SAMHD1Q9Y3Z3 626 aaKnown RBP1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 LRPPRCP42704 1394 aaKnown RBP1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 MYO5BQ9ULV0 1848 aa1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 ZNF638Q14966 1978 aaKnown RBP1.45□□□□□ -2.18
TRAPPC11-207ENST00000511409 CACNA1SQ13698 1873 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 PTPRKQ15262 1439 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 TRGV4A0A0C4DH28 118 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 VPS37CA5D8V6 355 aaPredicted RBP1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 H3BSA7 217 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 M0QYV0 167 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 BRI3O95415 125 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 NPPAP01160 153 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 F8A1P23610 371 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 SLC35A2P78381 396 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 PMS2P3Q13401 168 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 HTR4Q13639 388 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 PDGFRLQ15198 375 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 ZNHIT3Q15649 155 aaPredicted RBP1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 SDIM1Q6ZPB5 146 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 BOD1L2Q8IYS8 172 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 ZFAND2AQ8N6M9 145 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 TAMM41Q96BW9 452 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 CAPZA3Q96KX2 299 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 TMEM208Q9BTX3 173 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 OR52A5Q9H2C5 316 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 GLS2Q9UI32 602 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 DNAJC12Q9UKB3 198 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 ALG5Q9Y673 324 aa1.44□□□□□ -2.18
TRAPPC11-207ENST00000511409 SHANK3Q9BYB0 1731 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 TRPM3Q9HCF6 1732 aaPredicted RBP1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 F8VZ95 297 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 ATP6V1G2O95670 118 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 P0DMU3 169 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 FAM231AP0DMU4 169 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 FAM231CP0DMU5 169 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 PSMB3P49720 205 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 STC1P52823 247 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 KRTAP12-4P60329 112 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 FOXF1Q12946 379 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 EXOC3L4Q17RC7 722 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 TIMM23BQ5SRD1 257 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 YIPF7Q8N8F6 280 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 TMEM75Q8N9X5 138 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 OR4C16Q8NGL9 310 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 OR10A6Q8NH74 314 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 ANGPTL6Q8NI99 470 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 ERMNQ8TAM6 284 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 SMIM12Q96EX1 92 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 MGLLQ99685 303 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 BBS2Q9BXC9 721 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 C1orf109Q9NX04 203 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 LINC00527Q9UJ94 153 aa1.43□□□□□ -2.18
TRAPPC11-207ENST00000511409 A0A0J9YX75 114 aa1.42□□□□□ -2.18
TRAPPC11-207ENST00000511409 LINC00862A6NCI5 91 aa1.42□□□□□ -2.18
TRAPPC11-207ENST00000511409 C17orf51A8MQB3 221 aa1.42□□□□□ -2.18
TRAPPC11-207ENST00000511409 MKRN2OSH3BPM6 223 aa1.42□□□□□ -2.18
TRAPPC11-207ENST00000511409 TRAPPC3O43617 180 aa1.42□□□□□ -2.18
TRAPPC11-207ENST00000511409 NDUFS6O75380 124 aaKnown RBP1.42□□□□□ -2.18
TRAPPC11-207ENST00000511409 ARL6IP5O75915 188 aa1.42□□□□□ -2.18
TRAPPC11-207ENST00000511409 PET100P0DJ07 73 aa1.42□□□□□ -2.18
TRAPPC11-207ENST00000511409 ZNF7P17097 686 aaPredicted RBP1.42□□□□□ -2.18
TRAPPC11-207ENST00000511409 BLVRBP30043 206 aaPredicted RBP1.42□□□□□ -2.18
TRAPPC11-207ENST00000511409 LPAR6P43657 344 aa1.42□□□□□ -2.18
TRAPPC11-207ENST00000511409 RWDD2BP57060 319 aa1.42□□□□□ -2.18
TRAPPC11-207ENST00000511409 ZNF117Q03924 483 aa1.42□□□□□ -2.18
TRAPPC11-207ENST00000511409 SLAMF1Q13291 335 aa1.42□□□□□ -2.18
TRAPPC11-207ENST00000511409 FAM229BQ4G0N7 80 aa1.42□□□□□ -2.18
TRAPPC11-207ENST00000511409 DNAL1Q4LDG9 190 aa1.42□□□□□ -2.18
TRAPPC11-207ENST00000511409 ATP6V1G3Q96LB4 118 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms