RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 RHBDL2Q9NX52 303 aa7.05□□□□□ -1.28
PDLIM5-213ENST00000509357 ETAA1Q9NY74 926 aa7.05□□□□□ -1.28
PDLIM5-213ENST00000509357 TAS2R3Q9NYW6 316 aa7.05□□□□□ -1.28
PDLIM5-213ENST00000509357 CALYQ9NYX4 217 aa7.05□□□□□ -1.28
PDLIM5-213ENST00000509357 OR6C3Q9NZP0 311 aa7.05□□□□□ -1.28
PDLIM5-213ENST00000509357 SPATA2Q9UM82 520 aa7.05□□□□□ -1.28
PDLIM5-213ENST00000509357 SIGLEC9Q9Y336 463 aa7.05□□□□□ -1.28
PDLIM5-213ENST00000509357 MINOS1-NBL1R4GNA1 71 aa7.05□□□□□ -1.28
PDLIM5-213ENST00000509357 MGAM2Q2M2H8 2515 aa7.05□□□□□ -1.28
PDLIM5-213ENST00000509357 IGHV3-43A0A0B4J1X8 118 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 KBTBD11-OT1A0A1B0GTJ5 212 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 A0A1W2PPE3 182 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 TMEM30CPA0ZSE6 113 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 DPPA5A6NC42 116 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 ZNF729A6NN14 1252 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 MCRIP1C9JLW8 97 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 CD3GP09693 182 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 IGHV3-43DP0DP04 118 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 VSIG10L2P0DP72 767 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 HIST1H1DP16402 221 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 CEACAM3P40198 252 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 KIR2DS4P43632 304 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 PSMD7P51665 324 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 ZNF134P52741 427 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 PRRX1P54821 245 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 DIAPH2-AS1Q14236 149 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 HMGN3Q15651 99 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 ZNF439Q8NDP4 499 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 OR4P4Q8NGL7 312 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 NEK7Q8TDX7 302 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 PTX4Q96A99 478 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 SLIRPQ9GZT3 109 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 DPM3Q9P2X0 92 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 ZNF230Q9UIE0 474 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 SCOCQ9UIL1 159 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 HSF4Q9ULV5 492 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 TCF19Q9Y242 345 aa7.04□□□□□ -1.28
PDLIM5-213ENST00000509357 A0A075B6Q4 140 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 A0A087X0M5 115 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 A0A1B0GX30 115 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 TMEM235A6NFC5 223 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 VGLL3A8MV65 326 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 LEUTXA8MZ59 168 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 HPGDSO60760 199 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 IGLV1-47P01700 117 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 SCTP09683 121 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 ZNF182P17025 639 aaPredicted RBP7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 ELK1P19419 428 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 CD34P28906 385 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 BRS3P32247 399 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 KCNJ3P48549 501 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 TMBIM6P55061 237 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 KRTAP10-3P60369 221 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 C11orf88Q6PI97 169 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 C11orf44Q8N8P7 122 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 OR52L2PQ8NGH6 319 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 PIFOQ8TCI5 191 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 RAB2BQ8WUD1 216 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 NUDCD2Q8WVJ2 157 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 CREB3L1Q96BA8 519 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 C5orf30Q96GV9 206 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 PRSS22Q9GZN4 317 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 ATG5Q9H1Y0 275 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 ABCG5Q9H222 651 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 RANBP3Q9H6Z4 567 aaPredicted RBP7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 Q9N2K0 584 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.03□□□□□ -1.287e-8■■■■■ 35
PDLIM5-213ENST00000509357 IDI2-AS1Q9NZ38 188 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 TRRAPQ9Y4A5 3859 aa7.03□□□□□ -1.28
PDLIM5-213ENST00000509357 TRBV6-6A0A0A6YYG2 114 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 A6NDX4 124 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 LY6LH3BQJ8 138 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 CTDSP2O14595 271 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 CHST1O43916 411 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 HLA-DQB1P01920 261 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 HBZP02008 142 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 GLAP06280 429 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 FCGR3AP08637 254 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 CD24P25063 80 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 MNDAP41218 407 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 C2orf68Q2NKX9 166 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 CDNFQ49AH0 187 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 LAX1Q8IWV1 398 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 ODF3L1Q8IXM7 274 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 KLHDC1Q8N7A1 406 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 GVQW1Q8N7I0 195 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 SAMD12Q8N8I0 201 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 OR56B1Q8NGI3 324 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 OR10V1Q8NGI7 309 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 FAM110DQ8TAY7 271 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 ARL11Q969Q4 196 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 RAB3CQ96E17 227 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 AKR1E2Q96JD6 320 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 NEDD4LQ96PU5 975 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 URM1Q9BTM9 101 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 NXF2Q9GZY0 626 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 MMP27Q9H306 513 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 TAF9BQ9HBM6 251 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 SPACA1Q9HBV2 294 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 PLEKHJ1Q9NW61 149 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms