RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 ARSBP15848 533 aa14.85□□□□□ -0.03
UBE3D-207ENST00000509102 PSMD7P51665 324 aa14.85□□□□□ -0.03
UBE3D-207ENST00000509102 RPS25P62851 125 aaKnown RBP14.85□□□□□ -0.03
UBE3D-207ENST00000509102 TBCEQ15813 527 aaPredicted RBP14.85□□□□□ -0.03
UBE3D-207ENST00000509102 PDLIM3Q53GG5 364 aaPredicted RBP14.85□□□□□ -0.03
UBE3D-207ENST00000509102 HIST2H2BDQ6DRA6 164 aa14.85□□□□□ -0.03
UBE3D-207ENST00000509102 OR10K2Q6IF99 312 aa14.85□□□□□ -0.03
UBE3D-207ENST00000509102 SLC25A48Q6ZT89 311 aaKnown RBP14.85□□□□□ -0.03
UBE3D-207ENST00000509102 ZNF367Q7RTV3 350 aa14.85□□□□□ -0.03
UBE3D-207ENST00000509102 OR2T10Q8NGZ9 312 aa14.85□□□□□ -0.03
UBE3D-207ENST00000509102 OR1L1Q8NH94 360 aa14.85□□□□□ -0.03
UBE3D-207ENST00000509102 RTN4IP1Q8WWV3 396 aaPredicted RBP14.85□□□□□ -0.03
UBE3D-207ENST00000509102 GALMQ96C23 342 aa14.85□□□□□ -0.03
UBE3D-207ENST00000509102 Q9H521 79 aa14.85□□□□□ -0.03
UBE3D-207ENST00000509102 CHMP1AQ9HD42 196 aaPredicted RBP14.85□□□□□ -0.03
UBE3D-207ENST00000509102 PLEKHJ1Q9NW61 149 aa14.85□□□□□ -0.03
UBE3D-207ENST00000509102 JPT1Q9UK76 154 aa14.85□□□□□ -0.03
UBE3D-207ENST00000509102 NCBP2LA6PVI3 153 aaKnown RBP14.84□□□□□ -0.03
UBE3D-207ENST00000509102 AMY1AP04745 511 aa14.84□□□□□ -0.03
UBE3D-207ENST00000509102 AMY2AP04746 511 aa14.84□□□□□ -0.03
UBE3D-207ENST00000509102 PF4V1P10720 104 aa14.84□□□□□ -0.03
UBE3D-207ENST00000509102 CALRP27797 417 aaKnown RBP14.84□□□□□ -0.03
UBE3D-207ENST00000509102 CHATP28329 748 aa14.84□□□□□ -0.03
UBE3D-207ENST00000509102 RAB11BQ15907 218 aa14.84□□□□□ -0.03
UBE3D-207ENST00000509102 KHDC1LQ5JSQ8 128 aa14.84□□□□□ -0.03
UBE3D-207ENST00000509102 OR2W3Q7Z3T1 314 aa14.84□□□□□ -0.03
UBE3D-207ENST00000509102 IZUMO1Q8IYV9 350 aa14.84□□□□□ -0.03
UBE3D-207ENST00000509102 C5orf56Q8N8D9 126 aa14.84□□□□□ -0.03
UBE3D-207ENST00000509102 MRPL30Q8TCC3 161 aaKnown RBP14.84□□□□□ -0.03
UBE3D-207ENST00000509102 TM2D1Q9BX74 207 aa14.84□□□□□ -0.03
UBE3D-207ENST00000509102 TSSC4Q9Y5U2 329 aaPredicted RBP14.84□□□□□ -0.03
UBE3D-207ENST00000509102 A0A1W2PRX2 142 aa14.83□□□□□ -0.04
UBE3D-207ENST00000509102 SH2D7A6NKC9 451 aaPredicted RBP14.83□□□□□ -0.04
UBE3D-207ENST00000509102 SLC17A2O00624 439 aa14.83□□□□□ -0.04
UBE3D-207ENST00000509102 CD1BP29016 333 aa14.83□□□□□ -0.04
UBE3D-207ENST00000509102 BLVRBP30043 206 aaPredicted RBP14.83□□□□□ -0.04
UBE3D-207ENST00000509102 MAP2K4P45985 399 aa14.83□□□□□ -0.04
UBE3D-207ENST00000509102 HTD2P86397 168 aa14.83□□□□□ -0.04
UBE3D-207ENST00000509102 CD83Q01151 205 aa14.83□□□□□ -0.04
UBE3D-207ENST00000509102 FBLN7Q53RD9 439 aa14.83□□□□□ -0.04
UBE3D-207ENST00000509102 TMEM91Q6ZNR0 172 aa14.83□□□□□ -0.04
UBE3D-207ENST00000509102 C6orf201Q7Z4U5 140 aa14.83□□□□□ -0.04
UBE3D-207ENST00000509102 FOXRED2Q8IWF2 684 aa14.83□□□□□ -0.04
UBE3D-207ENST00000509102 SULT4A1Q9BR01 284 aa14.83□□□□□ -0.04
UBE3D-207ENST00000509102 FAAP24Q9BTP7 215 aa14.83□□□□□ -0.04
UBE3D-207ENST00000509102 RIMS4Q9H426 269 aaPredicted RBP14.83□□□□□ -0.04
UBE3D-207ENST00000509102 STEAP1Q9UHE8 339 aa14.83□□□□□ -0.04
UBE3D-207ENST00000509102 AK6Q9Y3D8 172 aaKnown RBP14.83□□□□□ -0.04
UBE3D-207ENST00000509102 IGHV3-72A0A0B4J1Y9 119 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 PSMB11A5LHX3 300 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 SERPINE3A8MV23 424 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 TMEM14DPA8MWL7 114 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 ATP6V1G2O95670 118 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 MOSP00540 346 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 ZNF137PP52743 207 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 SLC35B1P78383 322 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 UNC119Q13432 240 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 EBI3Q14213 229 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 P2RY14Q15391 338 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 MORN2Q502X0 79 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 CT45A1Q5HYN5 189 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 MOB1BQ7L9L4 216 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 SLC35E3Q7Z769 313 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 C1QL4Q86Z23 238 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 ZNF439Q8NDP4 499 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 OR8H1Q8NGG4 311 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 CT45A3Q8NHU0 189 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 CHPT1Q8WUD6 406 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 ST6GALNAC6Q969X2 333 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 EAF1Q96JC9 268 aaPredicted RBP14.82□□□□□ -0.04
UBE3D-207ENST00000509102 ABHD14AQ9BUJ0 271 aa14.82□□□□□ -0.04
UBE3D-207ENST00000509102 PDCD5O14737 125 aa14.81□□□□□ -0.04
UBE3D-207ENST00000509102 SLC31A2O15432 143 aa14.81□□□□□ -0.04
UBE3D-207ENST00000509102 MRPS14O60783 128 aaKnown RBP14.81□□□□□ -0.04
UBE3D-207ENST00000509102 CD37P11049 281 aa14.81□□□□□ -0.04
UBE3D-207ENST00000509102 FABP5Q01469 135 aa14.81□□□□□ -0.04
UBE3D-207ENST00000509102 SVOPQ8N4V2 548 aa14.81□□□□□ -0.04
UBE3D-207ENST00000509102 OR2AK2Q8NG84 335 aa14.81□□□□□ -0.04
UBE3D-207ENST00000509102 SETD6Q8TBK2 473 aa14.81□□□□□ -0.04
UBE3D-207ENST00000509102 IL1F10Q8WWZ1 152 aa14.81□□□□□ -0.04
UBE3D-207ENST00000509102 NICN1Q9BSH3 213 aa14.81□□□□□ -0.04
UBE3D-207ENST00000509102 GON7Q9BXV9 100 aa14.81□□□□□ -0.04
UBE3D-207ENST00000509102 MGAT4AQ9UM21 535 aa14.81□□□□□ -0.04
UBE3D-207ENST00000509102 LANCL1O43813 399 aa14.8□□□□□ -0.04
UBE3D-207ENST00000509102 YPEL1O60688 119 aa14.8□□□□□ -0.04
UBE3D-207ENST00000509102 PF4P02776 101 aa14.8□□□□□ -0.04
UBE3D-207ENST00000509102 MYL9P24844 172 aa14.8□□□□□ -0.04
UBE3D-207ENST00000509102 GABARAPL2P60520 117 aa14.8□□□□□ -0.04
UBE3D-207ENST00000509102 QRFPP83859 136 aa14.8□□□□□ -0.04
UBE3D-207ENST00000509102 FAM53AQ6NSI3 398 aaPredicted RBP14.8□□□□□ -0.04
UBE3D-207ENST00000509102 OR52L2PQ8NGH6 319 aa14.8□□□□□ -0.04
UBE3D-207ENST00000509102 YPEL2Q96QA6 119 aa14.8□□□□□ -0.04
UBE3D-207ENST00000509102 RASL11BQ9BPW5 248 aa14.8□□□□□ -0.04
UBE3D-207ENST00000509102 KCNK15Q9H427 330 aa14.8□□□□□ -0.04
UBE3D-207ENST00000509102 LIN7CQ9NUP9 197 aaKnown RBP14.8□□□□□ -0.04
UBE3D-207ENST00000509102 V9GY05 133 aa14.8□□□□□ -0.04
UBE3D-207ENST00000509102 ADARB2-AS1A8MUL3 147 aa14.79□□□□□ -0.04
UBE3D-207ENST00000509102 CD33P20138 364 aa14.79□□□□□ -0.04
UBE3D-207ENST00000509102 PPP1CCP36873 323 aaKnown RBP14.79□□□□□ -0.04
UBE3D-207ENST00000509102 ZNF134P52741 427 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms