RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 ABHD12BQ7Z5M8 362 aaPredicted RBP8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 DEFB128Q7Z7B8 93 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 VASH2Q86V25 355 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 BATF2Q8N1L9 274 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 ZNF525Q8N782 197 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 FGF14Q92915 247 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 TMEM186Q96B77 213 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 ZNF524Q96C55 264 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 KCNS1Q96KK3 526 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 WNT10AQ9GZT5 417 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 PILRAQ9UKJ1 303 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 IGKV1-9A0A0C4DH69 117 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 A0A1B0GV72 72 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 C17orf112F2Z3M2 114 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 SIRPB1O00241 398 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 DXOO77932 396 aaKnown RBP8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 PRNPP04156 253 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 KITLGP21583 273 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 RRADP55042 308 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 POU3F1Q03052 451 aaPredicted RBP8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 TLE1Q04724 770 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 PDGFRLQ15198 375 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 KISS1Q15726 138 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 LRRC75BQ2VPJ9 315 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 PET117Q6UWS5 81 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 C19orf35Q6ZS72 473 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 PRSS41Q7RTY9 318 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 DEFB125Q8N687 156 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 OR2M3Q8NG83 312 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 KLHDC7BQ96G42 594 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 GMPPAQ96IJ6 420 aaPredicted RBP8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 LRFN3Q9BTN0 628 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 CHODLQ9H9P2 273 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 KLHL13Q9P2N7 655 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 SSUH2Q9Y2M2 353 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 ATG2BQ96BY7 2078 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 LOC102725191A0A1B0GVB3 256 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 GJE1A6NN92 205 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 S1PR2O95136 353 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 CXCL10P02778 98 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 POU2F2P09086 479 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 OPRM1P35372 400 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 SCGB2A2Q13296 93 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 PSG3Q16557 428 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 TMEM52BQ4KMG9 183 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 CRIP3Q6Q6R5 217 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 FER1L6-AS1Q8NA97 138 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 OR4P4Q8NGL7 312 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 SFRP2Q96HF1 295 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 OR2A5Q96R48 311 aa8.59□□□□□ -1.03
PDGFRA-207ENST00000509092 TRAV9-2A0A087WT02 112 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 MDFIC2A0A1B0GVS7 189 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 NXPH3O95157 252 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 ZNF17P17021 662 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 VDAC1P21796 283 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 CCL1P22362 96 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 CCR2P41597 374 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 HLA-DRB5Q30154 266 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 CA13Q8N1Q1 262 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 SARAFQ96BY9 339 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 VWCEQ96DN2 955 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 RTN4RQ9BZR6 473 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 FBRSQ9HAH7 460 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 GNB4Q9HAV0 340 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 CTXND1A0A1B0GTU2 59 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 C1QTNF9BB2RNN3 333 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 C22orf46C9J442 243 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 H3BP45 60 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 HRKO00198 91 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 CDIPTO14735 213 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 C1QTNF9P0C862 333 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 PSG9Q00887 426 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 HIST3H3Q16695 136 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 OR10J3Q5JRS4 329 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 RPP25LQ8N5L8 163 aaKnown RBP8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 OR8B12Q8NGG6 310 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 GATAD1Q8WUU5 269 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 C11orf40Q8WZ69 217 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 SPSB1Q96BD6 273 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 Q96M66 194 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 RAB40CQ96S21 281 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 HEBP2Q9Y5Z4 205 aa8.58□□□□□ -1.04
PDGFRA-207ENST00000509092 MYO7BQ6PIF6 2116 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 TRBV9A0A0B4J1U6 114 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 A0A1W2PS18 150 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 PLPP3O14495 311 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 ZNF324O75467 553 aaPredicted RBP8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 IGKV1D-33P01593 117 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 IGKV1-33P01594 117 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 IGLC1P0CG04 106 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 PMCHP20382 165 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 ANOS1P23352 680 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 NPPCP23582 126 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 GFRA1P56159 465 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 RHOBP62745 196 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 PSG4Q00888 419 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 DOK3Q7L591 496 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 TBC1D26Q86UD7 250 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 ZNF295-AS1Q8N0V1 137 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms