RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 C14orf144Q96I85 54 aa3.23□□□□□ -1.89
SMARCA5-202ENST00000508573 SLC35G5Q96KT7 338 aa3.23□□□□□ -1.89
SMARCA5-202ENST00000508573 OCR1Q9BZK8 76 aa3.23□□□□□ -1.89
SMARCA5-202ENST00000508573 SDF2L1Q9HCN8 221 aa3.23□□□□□ -1.89
SMARCA5-202ENST00000508573 ACER3Q9NUN7 267 aa3.23□□□□□ -1.89
SMARCA5-202ENST00000508573 WASHC3Q9Y3C0 194 aa3.23□□□□□ -1.89
SMARCA5-202ENST00000508573 RBM7Q9Y580 266 aaKnown RBP3.23□□□□□ -1.89
SMARCA5-202ENST00000508573 IGHV3-16A0A0C4DH30 117 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 LOC389332A0A1B0GUA5 103 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 C5orf49A4QMS7 147 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 C5orf63A6NC05 138 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 MPTX1A8MV57 137 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 UPK1AO00322 258 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 UPK2O00526 184 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 ZNF780AO75290 641 aaPredicted RBP3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 PIAS1O75925 651 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 DUS4LO95620 317 aaKnown RBP3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 CRYBA1P05813 215 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 MPC1LP0DKB6 136 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 IGHV3-43DP0DP04 118 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 ZNF25P17030 456 aaPredicted RBP3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 RAB3AP20336 220 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 GATA2P23769 480 aaPredicted RBP3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 TALDO1P37837 337 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 RPS20P60866 119 aaKnown RBP3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 NCALDP61601 193 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 SNRPD2P62316 118 aaKnown RBP3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 FABP5Q01469 135 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 TMEM267Q0VDI3 215 aaPredicted RBP3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 DAZ2Q13117 558 aaKnown RBP3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 PAFAH1B3Q15102 231 aaKnown RBP3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 KCNJ8Q15842 424 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 ATP6AP1LQ52LC2 224 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 OR2B11Q5JQS5 317 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 ZFAND6Q6FIF0 208 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 ZNF343Q6P1L6 599 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 FAM19A3Q7Z5A8 133 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 DAZ4Q86SG3 579 aaKnown RBP3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 PRNTQ86SH4 94 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 KLHDC8BQ8IXV7 354 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 C20orf196Q8IYI0 205 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 TMEM61Q8N0U2 210 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 RXFP4Q8TDU9 374 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 TMEM203Q969S6 136 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 PDXPQ96GD0 296 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 HSPB9Q9BQS6 159 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 TCEAL7Q9BRU2 100 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 SFXN3Q9BWM7 321 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 OR52D1Q9H346 318 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 ZNF702PQ9H963 129 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 HES4Q9HCC6 221 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 DAZ1Q9NQZ3 744 aaKnown RBP3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 DAZ3Q9NR90 486 aaKnown RBP3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 AIG1Q9NVV5 245 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 TRMT112Q9UI30 125 aaKnown RBP3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 HSPB8Q9UJY1 196 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 SSR3Q9UNL2 185 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 ROBO3Q96MS0 1386 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 A2MP01023 1474 aa3.22□□□□□ -1.89
SMARCA5-202ENST00000508573 GREB1LQ9C091 1923 aaPredicted RBP3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 OVOS2A0A0J9YW53 1432 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 OVOS2Q6IE36 1432 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 WDR62O43379 1518 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 IGHV6-1A0A0B4J1U7 121 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 IGHV7-81A0A0B4J1V7 117 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 A0A1B0GV50 99 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 CIB4A0PJX0 185 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 EPOPA6NHQ4 379 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 SIGLEC16A6NMB1 481 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 FAM25AB3EWG3 89 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 FAM25CB3EWG5 89 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 FAM25GB3EWG6 89 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 ISLRO14498 428 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 COPEO14579 308 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 SS18L1O75177 396 aaPredicted RBP3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 IGHV3-48P01763 117 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 SERPINE1P05121 402 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 LGALS1P09382 135 aaKnown RBP3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 UBBP0CG47 229 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 RPL7P18124 248 aaKnown RBP3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 RPS3P23396 243 aaKnown RBP eCLIP3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 GADD45AP24522 165 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 BLVRBP30043 206 aaPredicted RBP3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 APLNRP35414 380 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 LHX2P50458 406 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 SLC18A1P54219 525 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 RRAS2P62070 204 aaPredicted RBP3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 MEF2CQ06413 473 aaPredicted RBP3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 BTN1A1Q13410 526 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 ARFRP1Q13795 201 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 C16orf72Q14CZ0 275 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 RBMY1FQ15415 496 aaKnown RBP3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 C12orf74Q32Q52 190 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 ZNF404Q494X3 552 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 C9orf66Q5T8R8 295 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 FAM53AQ6NSI3 398 aaPredicted RBP3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 ZNF493Q6ZR52 646 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 FA2HQ7L5A8 372 aa3.21□□□□□ -1.9
SMARCA5-202ENST00000508573 ATP5L2Q7Z4Y8 100 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms