RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 OSR2Q8N2R0 312 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 STPG2Q8N412 459 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 OR5M8Q8NGP6 311 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 OR6X1Q8NH79 312 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 ZNF420Q8TAQ5 688 aaPredicted RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 CNIH3Q8TBE1 160 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 DDOQ99489 341 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 PBOV1Q9GZY1 135 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 ZFAND3Q9H8U3 227 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 A4GNTQ9UNA3 340 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 FOXJ3Q9UPW0 622 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 OR5B21A6NL26 309 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 NOTOA8MTQ0 251 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 B4DSR2 109 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 NPIPB6E9PJ23 425 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 F5H5P2 479 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 FCGR3BO75015 233 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 FGF2P09038 288 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 ZNF708P17019 499 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 HLA-GP17693 338 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 RPS4Y1P22090 263 aaKnown RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 CRYGSP22914 178 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 GCSHP23434 173 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 GCAP28676 217 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 ACOT6Q3I5F7 207 aaPredicted RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 Q499Y3 187 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 FAM120AOSQ5T036 256 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 LYRM7Q5U5X0 104 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 FNDC7Q5VTL7 733 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 TBPL2Q6SJ96 375 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 BAGE3Q86Y29 109 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 BAGE2Q86Y30 109 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 DUSP18Q8NEJ0 188 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 GPR32P1Q8NGA4 272 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 FAM213BQ8TBF2 198 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 TMED6Q8WW62 240 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 PP6455Q8WZ26 134 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 HGDQ93099 445 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 MRAP2Q96G30 205 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 PACRGQ96M98 296 aaPredicted RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 MUS81Q96NY9 551 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 DOK1Q99704 481 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 GABARAPL1Q9H0R8 117 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 ZDHHC18Q9NUE0 388 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 UFC1Q9Y3C8 167 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 UGT2A1Q9Y4X1 527 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 FLVCR1Q9Y5Y0 555 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 HSPE1-MOB4S4R3N1 261 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 YLPM1P49750 1951 aaKnown RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 A0A1W2PQL4 384 aaPredicted RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 MRPS14O60783 128 aaKnown RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 IGHV3-13P01766 116 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 IGHV3-7P01780 117 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 ACSM4P0C7M7 580 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 ZNF32P17041 273 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 ACHEP22303 614 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 CHATP28329 748 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 CDC34P49427 236 aaPredicted RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 AQP4P55087 323 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 ZNF121P58317 390 aaPredicted RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 LYZP61626 148 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 RPL18Q07020 188 aaKnown RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 SRSF4Q08170 494 aaKnown RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 FUT7Q11130 342 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 IAH1Q2TAA2 248 aaPredicted RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 HIST2H3PS2Q5TEC6 136 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 ABLIM2Q6H8Q1 611 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 SIGLECL1Q8N7X8 197 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 OR52N1Q8NH53 320 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 TMEM163Q8TC26 289 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 ERGIC1Q969X5 290 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 CXorf58Q96LI9 332 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 SPAG8Q99932 426 aaPredicted RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 SDR39U1Q9NRG7 319 aaPredicted RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 SMPXQ9UHP9 88 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 IGKV3D-15A0A087WSY6 115 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 PRSS37A4D1T9 235 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 CEACAM4O75871 244 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 IGKV3-15P01624 115 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 CST2P09228 141 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 ERGP11308 486 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 CALCRP30988 508 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 MRPS11P82912 194 aaKnown RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 Q6ZN92 141 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 FAM131CQ96AQ9 280 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 TVP23CQ96ET8 276 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 ABHD14AQ9BUJ0 271 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 PLA2G12AQ9BZM1 189 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 PSG11Q9UQ72 335 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 HELTA6NFD8 242 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 LIPT2A6NK58 231 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 DEFB108AA8MXU0 73 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 XRCC3O43542 346 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 GPX5O75715 221 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 PPBPP02775 128 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 GAPDHP04406 335 aaKnown RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 NBEAP1P0C6P0 100 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 CRISP2P16562 243 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 ORM2P19652 201 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 GZMHP20718 246 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms