RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 NKAIN3Q8N8D7 197 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 CT45A3Q8NHU0 189 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 S1PR3Q99500 378 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 HSPB9Q9BQS6 159 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 GPR61Q9BZJ8 451 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 MBNL3Q9NUK0 354 aaKnown RBP10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 PSORS1C1Q9UIG5 152 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 PEX16Q9Y5Y5 336 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 KMT2CQ8NEZ4 4911 aaKnown RBP10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 H0YHG0 523 aa10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 MYL12BO14950 172 aa10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 CA11O75493 328 aa10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 RPLP1P05386 114 aaKnown RBP10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 MYCNOSP40205 109 aa10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 GNMTQ14749 295 aa10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 C6orf141Q5SZD1 244 aa10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 TEX38Q6PEX7 206 aa10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 LCNL1Q6ZST4 164 aa10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 RNF152Q8N8N0 203 aa10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 OR8H1Q8NGG4 311 aa10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 DPF1Q92782 380 aa10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 FAM46BQ96A09 425 aa10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 KCTD12Q96CX2 325 aaKnown RBP10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 RAX2Q96IS3 184 aa10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 DUX3Q96PT4 197 aa10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 UQCC2Q9BRT2 126 aa10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 RAB9BQ9NP90 201 aa10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 PLCXD1Q9NUJ7 323 aa10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 FKBP14Q9NWM8 211 aa10.21□□□□□ -0.77
HMGCS1-205ENST00000508319 UBE2QL1A1L167 161 aa10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 PDCD6O75340 191 aa10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 GLAP06280 429 aa10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 FUT3P21217 361 aa10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 MAPK3P27361 379 aaPredicted RBP10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 F2RL1P55085 397 aa10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 LSAMPQ13449 338 aa10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 FOXE3Q13461 319 aa10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 GPR50Q13585 617 aa10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 INSL4Q14641 139 aa10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 PNLIPRP3Q17RR3 467 aa10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 DEFB136Q30KP8 78 aa10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 OGFRL1Q5TC84 451 aaPredicted RBP10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 STEAP3Q658P3 488 aa10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 C11orf87Q6NUJ2 197 aa10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 ZNF554Q86TJ5 538 aa10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 NANOGP1Q8N7R0 232 aa10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 MRPL30Q8TCC3 161 aaKnown RBP10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 THRSPQ92748 146 aa10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 TFAP2CQ92754 450 aa10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 MCRIP2Q9BUT9 160 aaKnown RBP10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 GON7Q9BXV9 100 aa10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 TAF9BQ9HBM6 251 aa10.2□□□□□ -0.78
HMGCS1-205ENST00000508319 CASQ2O14958 399 aaPredicted RBP10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 LANCL1O43813 399 aa10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 RRP9O43818 475 aaKnown RBP10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 ELANEP08246 267 aa10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 SOX6P35712 828 aa10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 PPP1CCP36873 323 aaKnown RBP10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 GP2P55259 537 aaKnown RBP10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 MORN2Q502X0 79 aa10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 CXorf66Q5JRM2 361 aaPredicted RBP10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 FAM27D1Q5T7N8 215 aa10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 C5orf24Q7Z6I8 188 aa10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 ODF3L1Q8IXM7 274 aa10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 BPIFB6Q8NFQ5 453 aa10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 RASL11BQ9BPW5 248 aa10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 ABHD14AQ9BUJ0 271 aa10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 CST11Q9H112 138 aa10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 DCLRE1BQ9H816 532 aa10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 OR2S2Q9NQN1 319 aa10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 GHRLQ9UBU3 117 aa10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 JPT1Q9UK76 154 aa10.19□□□□□ -0.78
HMGCS1-205ENST00000508319 STAB2Q8WWQ8 2551 aa10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 CCL24O00175 119 aa10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 IGHG4P01861 327 aa10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 IGF1P05019 195 aa10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 SLC2A2P11168 524 aaPredicted RBP10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 MYF6P23409 242 aa10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 CHATP28329 748 aa10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 CDX1P47902 265 aaPredicted RBP10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 MMDQ15546 238 aa10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 DEFB121Q5J5C9 76 aa10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 NKAPLQ5M9Q1 402 aa10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 VAX1Q5SQQ9 334 aa10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 OR10K2Q6IF99 312 aa10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 OR52L2PQ8NGH6 319 aa10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 OR8U1Q8NH10 309 aa10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 SULT4A1Q9BR01 284 aa10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 MRPL20Q9BYC9 149 aaKnown RBP10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 ZNF580Q9UK33 172 aa10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 ERGIC3Q9Y282 383 aa10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 LSM2Q9Y333 95 aaKnown RBP10.18□□□□□ -0.78
HMGCS1-205ENST00000508319 SAA2-SAA4A0A096LPE2 208 aa10.17□□□□□ -0.78
HMGCS1-205ENST00000508319 SAA2P0DJI9 122 aaPredicted RBP10.17□□□□□ -0.78
HMGCS1-205ENST00000508319 VSIG8P0DPA2 414 aa10.17□□□□□ -0.78
HMGCS1-205ENST00000508319 VDAC1P21796 283 aa10.17□□□□□ -0.78
HMGCS1-205ENST00000508319 PSMB8P28062 276 aa10.17□□□□□ -0.78
HMGCS1-205ENST00000508319 RAB25P57735 213 aa10.17□□□□□ -0.78
HMGCS1-205ENST00000508319 HTD2P86397 168 aa10.17□□□□□ -0.78
HMGCS1-205ENST00000508319 GABPB1Q06547 395 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms