RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 IGLL5B9A064 214 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 TMEM250H0YL14 139 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 EEF1E1O43324 174 aaKnown RBP2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 CTSEP14091 401 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 GABRA1P14867 456 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 PRPS1L1P21108 318 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 MIPP30301 263 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 SLCO1A2P46721 670 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 TCL1AP56279 114 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 ACTBP60709 375 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 ACTG1P63261 375 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 HPCAP84074 193 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 TSPAN31Q12999 210 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 EIF4EBP1Q13541 118 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 PDK2Q15119 407 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 IMPG1Q17R60 797 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 CLVS2Q5SYC1 327 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 N4BP2L1Q5TBK1 243 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 SPATA31B1PQ5VZV4 182 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 OR10D3Q8NH80 312 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 OR4A5Q8NH83 315 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 TMA16Q96EY4 203 aaKnown RBP2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 SEC22CQ9BRL7 303 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 PLA2G12AQ9BZM1 189 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 OR51V1Q9H2C8 321 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 VSIRQ9H7M9 311 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 TRIM45Q9H8W5 580 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 LINC00574Q9H8X3 128 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 FAM60AQ9NP50 221 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 TAS2R9Q9NYW1 312 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 POLR1DQ9Y2S0 133 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 LSM5Q9Y4Y9 91 aaKnown RBP2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 ALG5Q9Y673 324 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 SCN1AP35498 2009 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 PTPRKQ15262 1439 aa2.4□□□□□ -2.03
TRAPPC13-209ENST00000508304 DNMT1P26358 1616 aaKnown RBP2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 C5orf49A4QMS7 147 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 A6NED7 52 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 OR5H14A6NHG9 310 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 TMEM210A6NLX4 147 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 TMEM114B3SHH9 223 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 STK16O75716 305 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 SERPINA6P08185 405 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 OR13C7P0DN81 318 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 CXCL3P19876 107 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 CNTFRP26992 372 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 PPP1CCP36873 323 aaKnown RBP2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 PSMB3P49720 205 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 REEP5Q00765 189 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 RSU1Q15404 277 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 SPA17Q15506 151 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 C8orf74Q6P047 294 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 TBPL2Q6SJ96 375 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 TRAPPC5Q8IUR0 188 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 HS3ST5Q8IZT8 346 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 ST20-AS1Q8NBB2 130 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 OR4C13Q8NGP0 309 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 OR51H1Q8NH63 302 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 CMBLQ96DG6 245 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 CCDC94Q9BW85 323 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 GTSF1LQ9H1H1 148 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 EMC3Q9P0I2 261 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 DKKL1Q9UK85 242 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 ZNF835Q9Y2P0 537 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 ICOSQ9Y6W8 199 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 ATRNO75882 1429 aa2.39□□□□□ -2.03
TRAPPC13-209ENST00000508304 LOXHD1Q8IVV2 1947 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 TRAV8-1A0A0A6YYK1 113 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 IGHV3-43A0A0B4J1X8 118 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 GOLGA6L4A6NEF3 574 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 RBBP9O75884 186 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 IL3P08700 152 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 UCHL3P15374 230 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 CD36P16671 472 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 CXCL2P19875 107 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 CCR7P32248 378 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 EVI2BP34910 448 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 HAAOP46952 286 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 OMPP47874 163 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 CXCR4P61073 352 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 MRPS25P82663 173 aaKnown RBP2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 DEFA6Q01524 100 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 EBPQ15125 230 aaKnown RBP2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 MMDQ15546 238 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 BATFQ16520 125 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 BCL2A1Q16548 175 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 LRRC26Q2I0M4 334 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 LGALSLQ3ZCW2 172 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 SAPCD1Q5SSQ6 148 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 C1orf195Q5TG92 126 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 HES3Q5TGS1 186 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 EBLN2Q6P2I7 272 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 HIST2H3AQ71DI3 136 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 GID4Q8IVV7 300 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 ZFP82Q8N141 532 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 ZNF709Q8N972 641 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 TMEM75Q8N9X5 138 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 ZFP62Q8NB50 900 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 HAVCR2Q8TDQ0 301 aa2.38□□□□□ -2.03
TRAPPC13-209ENST00000508304 C16orf78Q8WTQ4 265 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms