RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 PRH1P02810 166 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 IFNA4P05014 189 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 ZNF16P17020 682 aaPredicted RBP12.25□□□□□ -0.45
DDX41-208ENST00000507955 HLA-DRB3P79483 266 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 OR8G1Q15617 311 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 GPR157Q5UAW9 335 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 TMEM182Q6ZP80 229 aaPredicted RBP12.25□□□□□ -0.45
DDX41-208ENST00000507955 BOD1Q96IK1 185 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 TMEM56Q96MV1 263 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 PKIBQ9C010 78 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 PLK3Q9H4B4 646 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 DKK4Q9UBT3 224 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 OR2W1Q9Y3N9 320 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 TMEM56-RWDD3S4R434 201 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 PTPRBP23467 1997 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 TRAV17A0A0B4J275 112 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 hCG_1809904A0A1W2PP81 198 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 A0A1W2PR64 198 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 A0A1W2PRV1 198 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 C5orf52A6NGY3 159 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 M0R036 132 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 HSPA12AO43301 675 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 ARG1P05089 322 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 CD82P27701 267 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 RAB5BP61020 215 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 ERVK11-1P61568 191 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 EWSR1Q01844 656 aaKnown RBP eCLIP12.24□□□□□ -0.45
DDX41-208ENST00000507955 MRPL49Q13405 166 aaKnown RBP12.24□□□□□ -0.45
DDX41-208ENST00000507955 IL13RA2Q14627 380 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 GUSBP1Q15486 140 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 ROS1P08922 2347 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 ACACAQ13085 2346 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 LRP5LA4QPB2 252 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 WDR1O75083 606 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 CECR9P0C854 216 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 CCL20P78556 96 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 GNMTQ14749 295 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 ODF3L1Q8IXM7 274 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 CMTM1Q8IZ96 169 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 TMEM171Q8WVE6 324 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 RARRES2Q99969 163 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 IFT22Q9H7X7 185 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 RNF150Q9ULK6 438 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 RBM7Q9Y580 266 aaKnown RBP12.24□□□□□ -0.45
DDX41-208ENST00000507955 UMAD1C9J7I0 102 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 K7N7A8 449 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 AGAP20933 346 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 TESK1Q15569 626 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 KRBOX4Q5JUW0 171 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 IGFL2Q6UWQ7 119 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 Q6ZR03 302 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 Q6ZRM9 215 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 SLC16A13Q7RTY0 426 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 H1FOOQ8IZA3 346 aaPredicted RBP12.24□□□□□ -0.45
DDX41-208ENST00000507955 OR2C3Q8N628 320 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 FAM213BQ8TBF2 198 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 GTF3AQ92664 365 aaKnown RBP12.24□□□□□ -0.45
DDX41-208ENST00000507955 METRNQ9UJH8 293 aa12.24□□□□□ -0.45
DDX41-208ENST00000507955 USF3Q68DE3 2245 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 PCNX1Q96RV3 2341 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 A0A1W2PPE2 198 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 C1orf196B1AJZ1 125 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 GPR37O15354 613 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 PGA5P0DJD9 388 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 OR13C7P0DN81 318 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 F2RP25116 425 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 AESQ08117 197 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 NMSQ5H8A3 153 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 SEM1Q6ZVN7 128 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 C11orf53Q8IXP5 236 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 GLRX2Q9NS18 164 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 KCNS2Q9ULS6 477 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 CHD3Q12873 2000 aaKnown RBP12.23□□□□□ -0.45
DDX41-208ENST00000507955 CHST1O43916 411 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 TNFSF13O75888 250 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 MT-ND4LP03901 98 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 RAC2P15153 192 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 UCP1P25874 307 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 HOXC12P31275 282 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 HMGN3Q15651 99 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 SRSF7Q16629 238 aaKnown RBP eCLIP12.23□□□□□ -0.45
DDX41-208ENST00000507955 EIF2S3LQ2VIR3 472 aaKnown RBP12.23□□□□□ -0.45
DDX41-208ENST00000507955 ACSF3Q4G176 576 aaPredicted RBP12.23□□□□□ -0.45
DDX41-208ENST00000507955 ZNF880Q6PDB4 577 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 ZNF497Q6ZNH5 498 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 FAM24BQ8N5W8 94 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 COMMD1Q8N668 190 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 POM121Q96HA1 1249 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 TAAR3PQ9P1P4 343 aa12.23□□□□□ -0.45
DDX41-208ENST00000507955 APC2O95996 2303 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 AQP7O14520 342 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 CNOT4O95628 575 aaKnown RBP12.22□□□□□ -0.45
DDX41-208ENST00000507955 IGKV1-39P01597 117 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 IGKV3-15P01624 115 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 IGKV1D-39P04432 117 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 CEACAM6P40199 344 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 INO80CQ6PI98 192 aaPredicted RBP12.22□□□□□ -0.45
DDX41-208ENST00000507955 FAM185AQ8N0U4 392 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 NANPQ8TBE9 248 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 IQCF6A8MYZ5 107 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms