RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 MAS1P04201 325 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 VSIG8P0DPA2 414 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 SLC2A2P11168 524 aaPredicted RBP9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 MGMTP16455 207 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 RCC1P18754 421 aaPredicted RBP9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 MYF6P23409 242 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 SOX6P35712 828 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 VHLP40337 213 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 ADARB1P78563 741 aaKnown RBP9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 LSAMPQ13449 338 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 GNMTQ14749 295 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 C9orf66Q5T8R8 295 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 TRAT1Q6PIZ9 186 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 GAPTQ8N292 157 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 ZNF485Q8NCK3 441 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 SETD9Q8NE22 299 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 CYGBQ8WWM9 190 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 MRPS24Q96EL2 167 aaKnown RBP9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 KCTD7Q96MP8 289 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 WWC2-AS2Q96NR7 200 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 DERL3Q96Q80 235 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 PRR25Q96S07 402 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 SELENOIQ9C0D9 397 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 ZNF107Q9UII5 783 aaPredicted RBP9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 UBE2QL1A1L167 161 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 FAM90A10PA6NDY2 464 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 FAM90A7PA6NKC0 464 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 FAM90A23PA8MXZ1 464 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 LANCL1O43813 399 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 CA11O75493 328 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 CRTAPO75718 401 aaPredicted RBP9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 SC5DO75845 299 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 IGF1P05019 195 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 TAS2R43P59537 309 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 MMDQ15546 238 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 LRRC36Q1X8D7 754 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 TTC23Q5W5X9 447 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 SIGIRRQ6IA17 410 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 C5orf24Q7Z6I8 188 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 LYPD6Q86Y78 171 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 OR52L2PQ8NGH6 319 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 C4orf3Q8WVX3 66 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 GGHQ92820 318 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 Q96M66 194 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 TAF9BQ9HBM6 251 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 OR2S2Q9NQN1 319 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 ZNF580Q9UK33 172 aa9.02□□□□□ -0.97
HMGCS1-204ENST00000507293 SEC14L6B5MCN3 397 aa9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 PDCD6O75340 191 aa9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 OR5H8P0DN80 308 aa9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 FUT3P21217 361 aa9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 PSMB8P28062 276 aa9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 PPP1CCP36873 323 aaKnown RBP9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 CAPGP40121 348 aa9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 ECI1P42126 302 aa9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 ST3GAL4Q11206 333 aa9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 FHL3Q13643 280 aa9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 DOC2BQ14184 412 aa9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 MORN2Q502X0 79 aa9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 STEAP3Q658P3 488 aa9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 CDH26Q8IXH8 852 aa9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 NKAIN3Q8N8D7 197 aa9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 MRPL30Q8TCC3 161 aaKnown RBP9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 FAM46BQ96A09 425 aa9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 ABHD14AQ9BUJ0 271 aa9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 MRPL20Q9BYC9 149 aaKnown RBP9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 MBNL3Q9NUK0 354 aaKnown RBP9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 KCNIP1Q9NZI2 227 aa9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 JPT1Q9UK76 154 aa9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 LSM4Q9Y4Z0 139 aaKnown RBP9.01□□□□□ -0.97
HMGCS1-204ENST00000507293 EFCAB10A6NFE3 127 aa9□□□□□ -0.97
HMGCS1-204ENST00000507293 G3V318 75 aa9□□□□□ -0.97
HMGCS1-204ENST00000507293 MYL12BO14950 172 aa9□□□□□ -0.97
HMGCS1-204ENST00000507293 ATP6V0E1O15342 81 aa9□□□□□ -0.97
HMGCS1-204ENST00000507293 GLAP06280 429 aa9□□□□□ -0.97
HMGCS1-204ENST00000507293 CELP19835 753 aa9□□□□□ -0.97
HMGCS1-204ENST00000507293 CNTFRP26992 372 aa9□□□□□ -0.97
HMGCS1-204ENST00000507293 ACTBP60709 375 aa9□□□□□ -0.97
HMGCS1-204ENST00000507293 NKAPLQ5M9Q1 402 aa9□□□□□ -0.97
HMGCS1-204ENST00000507293 ODF3L1Q8IXM7 274 aa9□□□□□ -0.97
HMGCS1-204ENST00000507293 DHRSXQ8N5I4 330 aa9□□□□□ -0.97
HMGCS1-204ENST00000507293 OR11H1Q8NG94 326 aa9□□□□□ -0.97
HMGCS1-204ENST00000507293 MYOZ3Q8TDC0 251 aa9□□□□□ -0.97
HMGCS1-204ENST00000507293 NABP2Q9BQ15 211 aa9□□□□□ -0.97
HMGCS1-204ENST00000507293 GNB4Q9HAV0 340 aa9□□□□□ -0.97
HMGCS1-204ENST00000507293 SCOCQ9UIL1 159 aa9□□□□□ -0.97
HMGCS1-204ENST00000507293 WSB1Q9Y6I7 421 aa9□□□□□ -0.97
HMGCS1-204ENST00000507293 CD1AP06126 327 aa8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 NHLRC4P0CG21 123 aaPredicted RBP8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 OR3A3P47888 321 aa8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 WNT4P56705 351 aa8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 ZNF260Q3ZCT1 412 aa8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 C6orf141Q5SZD1 244 aa8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 ASPHD1Q5U4P2 390 aa8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 LAIR2Q6ISS4 152 aa8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 AHSA2Q719I0 299 aa8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 ZNF554Q86TJ5 538 aa8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 PACRGLQ8N7B6 248 aa8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 RITA1Q96K30 269 aa8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 OR5B12Q96R08 314 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 233.9 ms