RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 PSMB3P49720 205 aa15.14■□□□□ 0.01
NUP54-205ENST00000507257 RAC3P60763 192 aa15.14■□□□□ 0.01
NUP54-205ENST00000507257 COLCA1Q6ZS62 124 aa15.14■□□□□ 0.01
NUP54-205ENST00000507257 KIR2DL5AQ8N109 375 aa15.14■□□□□ 0.01
NUP54-205ENST00000507257 NAXEQ8NCW5 288 aa15.14■□□□□ 0.01
NUP54-205ENST00000507257 TAF15Q92804 592 aaKnown RBP eCLIP15.14■□□□□ 0.01
NUP54-205ENST00000507257 SLC39A9Q9NUM3 307 aa15.14■□□□□ 0.01
NUP54-205ENST00000507257 M0R143 59 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 FGF5P12034 268 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 BCL3P20749 454 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 C1orf194Q5T5A4 169 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 GBGT1Q8N5D6 347 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 OR2T10Q8NGZ9 312 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 GPHA2Q96T91 129 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 SNHG12Q9BXW3 62 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 PLK3Q9H4B4 646 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 XIRP2A4UGR9 3374 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 SPAG17Q6Q759 2223 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 MED12Q93074 2177 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 TMEM210A6NLX4 147 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 CD300LBA8K4G0 201 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 SLC33A1O00400 549 aaPredicted RBP15.13■□□□□ 0.01
NUP54-205ENST00000507257 SCRG1O75711 98 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 TIAF1O95411 115 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 MBP02144 154 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 EDN3P14138 238 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 IDH3GP51553 393 aaPredicted RBP15.13■□□□□ 0.01
NUP54-205ENST00000507257 PRSS12P56730 875 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 ERVS71-1P61550 626 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 NRN1LQ496H8 165 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 Q6ZRM9 215 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 MRPL30Q8TCC3 161 aaKnown RBP15.13■□□□□ 0.01
NUP54-205ENST00000507257 PCGF1Q9BSM1 259 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 PARLQ9H300 379 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 CACNG5Q9UF02 275 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 REV3LO60673 3130 aa15.13■□□□□ 0.01
NUP54-205ENST00000507257 CTXND1A0A1B0GTU2 59 aa15.12■□□□□ 0.01
NUP54-205ENST00000507257 LRRC3CA6NJW4 275 aa15.12■□□□□ 0.01
NUP54-205ENST00000507257 PSG2P11465 335 aa15.12■□□□□ 0.01
NUP54-205ENST00000507257 CD99P14209 185 aa15.12■□□□□ 0.01
NUP54-205ENST00000507257 C17orf78Q8N4C9 275 aa15.12■□□□□ 0.01
NUP54-205ENST00000507257 RPP25LQ8N5L8 163 aaKnown RBP15.12■□□□□ 0.01
NUP54-205ENST00000507257 DEFB119Q8N690 84 aa15.12■□□□□ 0.01
NUP54-205ENST00000507257 OR4C12Q96R67 309 aa15.12■□□□□ 0.01
NUP54-205ENST00000507257 FOXB1Q99853 325 aa15.12■□□□□ 0.01
NUP54-205ENST00000507257 SRXN1Q9BYN0 137 aa15.12■□□□□ 0.01
NUP54-205ENST00000507257 PROK2Q9HC23 129 aa15.12■□□□□ 0.01
NUP54-205ENST00000507257 TNRC6AQ8NDV7 1962 aaKnown RBP15.12■□□□□ 0.01
NUP54-205ENST00000507257 LOC102723996A0A087X1L8 192 aa15.11■□□□□ 0.01
NUP54-205ENST00000507257 M0QZK8 103 aa15.11■□□□□ 0.01
NUP54-205ENST00000507257 CRYABP02511 175 aaKnown RBP15.11■□□□□ 0.01
NUP54-205ENST00000507257 RELQ04864 619 aaPredicted RBP15.11■□□□□ 0.01
NUP54-205ENST00000507257 KCNIP4Q6PIL6 250 aa15.11■□□□□ 0.01
NUP54-205ENST00000507257 CLDN23Q96B33 292 aa15.11■□□□□ 0.01
NUP54-205ENST00000507257 SH2D2AQ9NP31 389 aa15.11■□□□□ 0.01
NUP54-205ENST00000507257 KIAA2026Q5HYC2 2103 aa15.11■□□□□ 0.01
NUP54-205ENST00000507257 ZNF716A6NP11 495 aa15.11■□□□□ 0.01
NUP54-205ENST00000507257 DEGS1O15121 323 aa15.11■□□□□ 0.01
NUP54-205ENST00000507257 TNFSF12O43508 249 aa15.11■□□□□ 0.01
NUP54-205ENST00000507257 IGKV1-39P01597 117 aa15.11■□□□□ 0.01
NUP54-205ENST00000507257 IGKV1D-39P04432 117 aa15.11■□□□□ 0.01
NUP54-205ENST00000507257 MMP7P09237 267 aaPredicted RBP15.11■□□□□ 0.01
NUP54-205ENST00000507257 JMJD7P0C870 316 aa15.11■□□□□ 0.01
NUP54-205ENST00000507257 B4GALT1P15291 398 aa15.11■□□□□ 0.01
NUP54-205ENST00000507257 CNN1P51911 297 aaKnown RBP15.11■□□□□ 0.01
NUP54-205ENST00000507257 ATP6V1FQ16864 119 aa15.11■□□□□ 0.01
NUP54-205ENST00000507257 TMEM14EPQ6UXP3 125 aa15.11■□□□□ 0.01
NUP54-205ENST00000507257 MKXQ8IYA7 352 aa15.11■□□□□ 0.01
NUP54-205ENST00000507257 OR6C1Q96RD1 312 aa15.11■□□□□ 0.01
NUP54-205ENST00000507257 FUT9Q9Y231 359 aa15.11■□□□□ 0.01
NUP54-205ENST00000507257 CHD3Q12873 2000 aaKnown RBP15.1■□□□□ 0.01
NUP54-205ENST00000507257 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.1■□□□□ 0.01
NUP54-205ENST00000507257 TUBG1P23258 451 aa15.1■□□□□ 0.01
NUP54-205ENST00000507257 LBX1P52954 281 aa15.1■□□□□ 0.01
NUP54-205ENST00000507257 MRPL41Q8IXM3 137 aaKnown RBP15.1■□□□□ 0.01
NUP54-205ENST00000507257 OR10J5Q8NHC4 309 aa15.1■□□□□ 0.01
NUP54-205ENST00000507257 RARRES3Q9UL19 164 aa15.1■□□□□ 0.01
NUP54-205ENST00000507257 A0A1W2PPQ1 181 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 IGKV1-5P01602 117 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 OR4A8P0C604 315 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 PCOLCEQ15113 449 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 CEACAM21Q3KPI0 293 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 MRPL14Q6P1L8 145 aaKnown RBP15.09■□□□□ 0.01
NUP54-205ENST00000507257 BTNL3Q6UXE8 466 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 NECAP1Q8NC96 275 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 OR10V1Q8NGI7 309 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 RPUSD4Q96CM3 377 aaKnown RBP15.09■□□□□ 0.01
NUP54-205ENST00000507257 RBM14Q96PK6 669 aaKnown RBP15.09■□□□□ 0.01
NUP54-205ENST00000507257 RYDENQ9NUL5 291 aaKnown RBP15.09■□□□□ 0.01
NUP54-205ENST00000507257 ABCA7Q8IZY2 2146 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 CBR3O75828 277 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 IGKV1D-33P01593 117 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 IGKV1-33P01594 117 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 GYPAP02724 150 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 IAPPP10997 89 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 NTF4P34130 210 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 TDGF1P3P51864 188 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 CCL7P80098 99 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 SLC38A11Q08AI6 406 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 AAED1Q7RTV5 226 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms