RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 OR52L2PQ8NGH6 319 aa14.65□□□□□ -0.06
NPHP4-210ENST00000506941 Q9N2K0 584 aa14.65□□□□□ -0.06
NPHP4-210ENST00000506941 RAB9BQ9NP90 201 aa14.65□□□□□ -0.06
NPHP4-210ENST00000506941 ABRACLQ9P1F3 81 aa14.65□□□□□ -0.06
NPHP4-210ENST00000506941 GNG12Q9UBI6 72 aa14.65□□□□□ -0.06
NPHP4-210ENST00000506941 SPATA2Q9UM82 520 aa14.65□□□□□ -0.06
NPHP4-210ENST00000506941 BTBD17A6NE02 478 aa14.64□□□□□ -0.07
NPHP4-210ENST00000506941 TMEM127O75204 238 aa14.64□□□□□ -0.07
NPHP4-210ENST00000506941 CD3GP09693 182 aa14.64□□□□□ -0.07
NPHP4-210ENST00000506941 HKR1P10072 659 aa14.64□□□□□ -0.07
NPHP4-210ENST00000506941 PPP1CCP36873 323 aaKnown RBP14.64□□□□□ -0.07
NPHP4-210ENST00000506941 ZNF134P52741 427 aa14.64□□□□□ -0.07
NPHP4-210ENST00000506941 HLA-DRB3P79483 266 aa14.64□□□□□ -0.07
NPHP4-210ENST00000506941 HTD2P86397 168 aa14.64□□□□□ -0.07
NPHP4-210ENST00000506941 DIAPH2-AS1Q14236 149 aa14.64□□□□□ -0.07
NPHP4-210ENST00000506941 LINC00311Q8N616 119 aa14.64□□□□□ -0.07
NPHP4-210ENST00000506941 C8orf31Q8N9H6 132 aa14.64□□□□□ -0.07
NPHP4-210ENST00000506941 OR2S2Q9NQN1 319 aa14.64□□□□□ -0.07
NPHP4-210ENST00000506941 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.64□□□□□ -0.07
NPHP4-210ENST00000506941 AMMECR1Q9Y4X0 333 aaPredicted RBP14.64□□□□□ -0.07
NPHP4-210ENST00000506941 TMEM89A2RUT3 159 aa14.63□□□□□ -0.07
NPHP4-210ENST00000506941 SERPINE3A8MV23 424 aa14.63□□□□□ -0.07
NPHP4-210ENST00000506941 FCGR3AP08637 254 aa14.63□□□□□ -0.07
NPHP4-210ENST00000506941 CEACAM3P40198 252 aa14.63□□□□□ -0.07
NPHP4-210ENST00000506941 RPL5P46777 297 aaKnown RBP14.63□□□□□ -0.07
NPHP4-210ENST00000506941 DYNLT3P51808 116 aa14.63□□□□□ -0.07
NPHP4-210ENST00000506941 RELBQ01201 579 aa14.63□□□□□ -0.07
NPHP4-210ENST00000506941 Q3ZCU0 254 aa14.63□□□□□ -0.07
NPHP4-210ENST00000506941 CDNFQ49AH0 187 aa14.63□□□□□ -0.07
NPHP4-210ENST00000506941 MORN2Q502X0 79 aa14.63□□□□□ -0.07
NPHP4-210ENST00000506941 FBLN7Q53RD9 439 aa14.63□□□□□ -0.07
NPHP4-210ENST00000506941 CT45A1Q5HYN5 189 aa14.63□□□□□ -0.07
NPHP4-210ENST00000506941 SLC25A48Q6ZT89 311 aaKnown RBP14.63□□□□□ -0.07
NPHP4-210ENST00000506941 OR10X1Q8NGY0 326 aa14.63□□□□□ -0.07
NPHP4-210ENST00000506941 CT45A3Q8NHU0 189 aa14.63□□□□□ -0.07
NPHP4-210ENST00000506941 CREB3L1Q96BA8 519 aa14.63□□□□□ -0.07
NPHP4-210ENST00000506941 GALMQ96C23 342 aa14.63□□□□□ -0.07
NPHP4-210ENST00000506941 C1RLQ9NZP8 487 aa14.63□□□□□ -0.07
NPHP4-210ENST00000506941 JPT1Q9UK76 154 aa14.63□□□□□ -0.07
NPHP4-210ENST00000506941 TMEM235A6NFC5 223 aa14.62□□□□□ -0.07
NPHP4-210ENST00000506941 POM121CA8CG34 1229 aa14.62□□□□□ -0.07
NPHP4-210ENST00000506941 CHST1O43916 411 aa14.62□□□□□ -0.07
NPHP4-210ENST00000506941 SCGNO76038 276 aa14.62□□□□□ -0.07
NPHP4-210ENST00000506941 SCTP09683 121 aa14.62□□□□□ -0.07
NPHP4-210ENST00000506941 MADCAM1Q13477 382 aa14.62□□□□□ -0.07
NPHP4-210ENST00000506941 ZNF260Q3ZCT1 412 aa14.62□□□□□ -0.07
NPHP4-210ENST00000506941 CCBE1Q6UXH8 406 aaPredicted RBP14.62□□□□□ -0.07
NPHP4-210ENST00000506941 CLVS1Q8IUQ0 354 aaPredicted RBP14.62□□□□□ -0.07
NPHP4-210ENST00000506941 IL1F10Q8WWZ1 152 aa14.62□□□□□ -0.07
NPHP4-210ENST00000506941 MAFIPQ8WZ33 124 aa14.62□□□□□ -0.07
NPHP4-210ENST00000506941 GCDHQ92947 438 aaPredicted RBP14.62□□□□□ -0.07
NPHP4-210ENST00000506941 TOMM40LQ969M1 308 aa14.62□□□□□ -0.07
NPHP4-210ENST00000506941 OCSTAMPQ9BR26 566 aa14.62□□□□□ -0.07
NPHP4-210ENST00000506941 DCSTAMPQ9H295 470 aa14.62□□□□□ -0.07
NPHP4-210ENST00000506941 ZNF230Q9UIE0 474 aaPredicted RBP14.62□□□□□ -0.07
NPHP4-210ENST00000506941 IGKV1-6A0A0C4DH72 117 aa14.61□□□□□ -0.07
NPHP4-210ENST00000506941 A0A1W2PPI3 338 aa14.61□□□□□ -0.07
NPHP4-210ENST00000506941 GSTP1P09211 210 aaKnown RBP14.61□□□□□ -0.07
NPHP4-210ENST00000506941 CD24P25063 80 aa14.61□□□□□ -0.07
NPHP4-210ENST00000506941 RPL15P61313 204 aaKnown RBP14.61□□□□□ -0.07
NPHP4-210ENST00000506941 MRPS15P82914 257 aaKnown RBP14.61□□□□□ -0.07
NPHP4-210ENST00000506941 ARFRP1Q13795 201 aa14.61□□□□□ -0.07
NPHP4-210ENST00000506941 SPCS2Q15005 226 aa14.61□□□□□ -0.07
NPHP4-210ENST00000506941 HERPUD1Q15011 391 aa14.61□□□□□ -0.07
NPHP4-210ENST00000506941 UBE2NLQ5JXB2 153 aa14.61□□□□□ -0.07
NPHP4-210ENST00000506941 HACD4Q5VWC8 232 aa14.61□□□□□ -0.07
NPHP4-210ENST00000506941 IZUMO1Q8IYV9 350 aa14.61□□□□□ -0.07
NPHP4-210ENST00000506941 SAMD12Q8N8I0 201 aa14.61□□□□□ -0.07
NPHP4-210ENST00000506941 RPEQ96AT9 228 aa14.61□□□□□ -0.07
NPHP4-210ENST00000506941 PARP12Q9H0J9 701 aaKnown RBP14.61□□□□□ -0.07
NPHP4-210ENST00000506941 ABCG5Q9H222 651 aa14.61□□□□□ -0.07
NPHP4-210ENST00000506941 ABCB10Q9NRK6 738 aa14.61□□□□□ -0.07
NPHP4-210ENST00000506941 OR1A1Q9P1Q5 309 aa14.61□□□□□ -0.07
NPHP4-210ENST00000506941 MGAT4AQ9UM21 535 aa14.61□□□□□ -0.07
NPHP4-210ENST00000506941 TCF19Q9Y242 345 aa14.61□□□□□ -0.07
NPHP4-210ENST00000506941 A6NDX4 124 aa14.6□□□□□ -0.07
NPHP4-210ENST00000506941 OOSP1A8MZH6 123 aa14.6□□□□□ -0.07
NPHP4-210ENST00000506941 TRDCB7Z8K6 153 aa14.6□□□□□ -0.07
NPHP4-210ENST00000506941 YPEL1O60688 119 aa14.6□□□□□ -0.07
NPHP4-210ENST00000506941 ARL6IP1Q15041 203 aa14.6□□□□□ -0.07
NPHP4-210ENST00000506941 LY6G6FQ5SQ64 297 aa14.6□□□□□ -0.07
NPHP4-210ENST00000506941 STEAP3Q658P3 488 aa14.6□□□□□ -0.07
NPHP4-210ENST00000506941 TMEM219Q86XT9 240 aa14.6□□□□□ -0.07
NPHP4-210ENST00000506941 NUDCD2Q8WVJ2 157 aa14.6□□□□□ -0.07
NPHP4-210ENST00000506941 ST6GALNAC6Q969X2 333 aa14.6□□□□□ -0.07
NPHP4-210ENST00000506941 KCTD12Q96CX2 325 aaKnown RBP14.6□□□□□ -0.07
NPHP4-210ENST00000506941 YPEL2Q96QA6 119 aa14.6□□□□□ -0.07
NPHP4-210ENST00000506941 SCOCQ9UIL1 159 aa14.6□□□□□ -0.07
NPHP4-210ENST00000506941 TRAV18A0A075B6X5 111 aa14.59□□□□□ -0.07
NPHP4-210ENST00000506941 IGKV1D-8A0A087WSZ0 117 aa14.59□□□□□ -0.07
NPHP4-210ENST00000506941 A0A0A6YYH2 397 aa14.59□□□□□ -0.07
NPHP4-210ENST00000506941 A6NJ64 397 aa14.59□□□□□ -0.07
NPHP4-210ENST00000506941 HSD17B6O14756 317 aa14.59□□□□□ -0.07
NPHP4-210ENST00000506941 TIMM23O14925 209 aa14.59□□□□□ -0.07
NPHP4-210ENST00000506941 SSX5O60225 188 aa14.59□□□□□ -0.07
NPHP4-210ENST00000506941 REG1BP48304 166 aa14.59□□□□□ -0.07
NPHP4-210ENST00000506941 COMPP49747 757 aaPredicted RBP14.59□□□□□ -0.07
NPHP4-210ENST00000506941 RORCP51449 518 aa14.59□□□□□ -0.07
NPHP4-210ENST00000506941 ZNF816Q0VGE8 651 aaPredicted RBP14.59□□□□□ -0.07
NPHP4-210ENST00000506941 AWAT1Q58HT5 328 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms