RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 HBG1P69891 147 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 HBG2P69892 147 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 CFHR1Q03591 330 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 ZNF611Q8N823 705 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 OR1F12Q8NHA8 337 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 PSENENQ9NZ42 101 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 PIGBOS1A0A0B4J2F0 54 aa14.59□□□□□ -0.07
SQSTM1-211ENST00000506690 hCG_38984A0A1B0GV85 526 aa14.59□□□□□ -0.07
SQSTM1-211ENST00000506690 A6NNC1 897 aa14.59□□□□□ -0.07
SQSTM1-211ENST00000506690 TOX3O15405 576 aaPredicted RBP14.59□□□□□ -0.07
SQSTM1-211ENST00000506690 IZUMO4Q1ZYL8 232 aa14.59□□□□□ -0.07
SQSTM1-211ENST00000506690 DEFB133Q30KQ1 61 aa14.59□□□□□ -0.07
SQSTM1-211ENST00000506690 ULBP2Q9BZM5 246 aa14.59□□□□□ -0.07
SQSTM1-211ENST00000506690 ZNF391Q9UJN7 358 aa14.59□□□□□ -0.07
SQSTM1-211ENST00000506690 MMP17Q9ULZ9 603 aa14.59□□□□□ -0.07
SQSTM1-211ENST00000506690 MYO15AQ9UKN7 3530 aa14.59□□□□□ -0.07
SQSTM1-211ENST00000506690 GYPAP02724 150 aa14.58□□□□□ -0.07
SQSTM1-211ENST00000506690 IAPPP10997 89 aa14.58□□□□□ -0.07
SQSTM1-211ENST00000506690 OR1D5P58170 312 aa14.58□□□□□ -0.07
SQSTM1-211ENST00000506690 KRTAP27-1Q3LI81 207 aa14.58□□□□□ -0.07
SQSTM1-211ENST00000506690 PLCXD3Q63HM9 321 aa14.58□□□□□ -0.07
SQSTM1-211ENST00000506690 FAM180AQ6UWF9 173 aa14.58□□□□□ -0.07
SQSTM1-211ENST00000506690 CARFQ8N187 725 aa14.58□□□□□ -0.07
SQSTM1-211ENST00000506690 BATF2Q8N1L9 274 aa14.58□□□□□ -0.07
SQSTM1-211ENST00000506690 TAF15Q92804 592 aaKnown RBP eCLIP14.58□□□□□ -0.07
SQSTM1-211ENST00000506690 OR4C12Q96R67 309 aa14.58□□□□□ -0.07
SQSTM1-211ENST00000506690 IGHV3-15A0A0B4J1V0 119 aa14.58□□□□□ -0.08
SQSTM1-211ENST00000506690 NPIPA2E9PIF3 369 aa14.58□□□□□ -0.08
SQSTM1-211ENST00000506690 NPIPA3F8WFD2 350 aa14.58□□□□□ -0.08
SQSTM1-211ENST00000506690 LILRA1O75019 489 aa14.58□□□□□ -0.08
SQSTM1-211ENST00000506690 VENTXO95231 258 aa14.58□□□□□ -0.08
SQSTM1-211ENST00000506690 CTXN2P0C2S0 81 aa14.58□□□□□ -0.08
SQSTM1-211ENST00000506690 MRPS11P82912 194 aaKnown RBP14.58□□□□□ -0.08
SQSTM1-211ENST00000506690 KCNIP4Q6PIL6 250 aa14.58□□□□□ -0.08
SQSTM1-211ENST00000506690 ZNF705AQ6ZN79 300 aaPredicted RBP14.58□□□□□ -0.08
SQSTM1-211ENST00000506690 TMEM256Q8N2U0 113 aa14.58□□□□□ -0.08
SQSTM1-211ENST00000506690 ZNF501Q96CX3 271 aaPredicted RBP14.58□□□□□ -0.08
SQSTM1-211ENST00000506690 MS4A10Q96PG2 267 aa14.58□□□□□ -0.08
SQSTM1-211ENST00000506690 RASL10BQ96S79 203 aa14.58□□□□□ -0.08
SQSTM1-211ENST00000506690 KIR2DS1A0A191URI9 304 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 VAMP5O95183 116 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 PSG2P11465 335 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 IRF2P14316 349 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 IL3RAP26951 378 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 WNT5AP41221 380 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 KIR2DS4P43632 304 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 TLE1Q04724 770 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 KIR2DS1Q14954 304 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 C21orf62-AS1Q17RA5 79 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 ZCCHC14Q8WYQ9 949 aaKnown RBP14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 TBX15Q96SF7 602 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 C20orf144Q9BQM9 153 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 UBE2ZQ9H832 354 aaPredicted RBP14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 CACNG5Q9UF02 275 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 TIMM9Q9Y5J7 89 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 ATP23Q9Y6H3 246 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 IGLV3-12A0A075B6K2 115 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 OR6C6A6NF89 314 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 NUPR1O60356 82 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 SERPINE2P07093 398 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 TESK1Q15569 626 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 PCSK4Q6UW60 755 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 ZIC4Q8N9L1 334 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 PIGCQ92535 297 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 LSM10Q969L4 123 aaKnown RBP14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 TECTBQ96PL2 329 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 UCN2Q96RP3 112 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 ASXL3Q9C0F0 2248 aa14.57□□□□□ -0.08
SQSTM1-211ENST00000506690 IGHV1OR21-1A0A087WYE8 117 aa14.56□□□□□ -0.08
SQSTM1-211ENST00000506690 YPEL1O60688 119 aa14.56□□□□□ -0.08
SQSTM1-211ENST00000506690 WNT2P09544 360 aa14.56□□□□□ -0.08
SQSTM1-211ENST00000506690 CLDN15P56746 228 aa14.56□□□□□ -0.08
SQSTM1-211ENST00000506690 OR4F5Q8NH21 305 aa14.56□□□□□ -0.08
SQSTM1-211ENST00000506690 YPEL2Q96QA6 119 aa14.56□□□□□ -0.08
SQSTM1-211ENST00000506690 OR4F4Q96R69 305 aa14.56□□□□□ -0.08
SQSTM1-211ENST00000506690 FGF21Q9NSA1 209 aa14.56□□□□□ -0.08
SQSTM1-211ENST00000506690 PXMP4Q9Y6I8 212 aa14.56□□□□□ -0.08
SQSTM1-211ENST00000506690 ZNF816-ZNF321PA0A0X1KG74 233 aa14.56□□□□□ -0.08
SQSTM1-211ENST00000506690 IGKV1-39P01597 117 aa14.56□□□□□ -0.08
SQSTM1-211ENST00000506690 IGKV1D-39P04432 117 aa14.56□□□□□ -0.08
SQSTM1-211ENST00000506690 BRS3P32247 399 aa14.56□□□□□ -0.08
SQSTM1-211ENST00000506690 PCP4P48539 62 aa14.56□□□□□ -0.08
SQSTM1-211ENST00000506690 TMEM144Q7Z5S9 345 aa14.56□□□□□ -0.08
SQSTM1-211ENST00000506690 MIEN1Q9BRT3 115 aa14.56□□□□□ -0.08
SQSTM1-211ENST00000506690 MANBALQ9NQG1 85 aa14.56□□□□□ -0.08
SQSTM1-211ENST00000506690 WNT16Q9UBV4 365 aa14.56□□□□□ -0.08
SQSTM1-211ENST00000506690 A0A1B0GUS0 222 aa14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 ZNF705FA8MVS1 300 aaPredicted RBP14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 DKK1O94907 266 aa14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 ZNF705DP0CH99 300 aaPredicted RBP14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 ZNF705BP0CI00 300 aaPredicted RBP14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 S100GP29377 79 aa14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 PLA2G5P39877 138 aa14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 OR51H1Q8NH63 302 aa14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 GATAD1Q8WUU5 269 aa14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 LPAR2Q9HBW0 351 aa14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 GPR35Q9HC97 309 aa14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 TRAPPC1Q9Y5R8 145 aa14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 UNC13CQ8NB66 2214 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms