RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 C1orf100Q5SVJ3 147 aa8.35□□□□□ -1.07
NR1I3-222ENST00000506018 ATAD3CQ5T2N8 411 aa8.35□□□□□ -1.07
NR1I3-222ENST00000506018 RSBN1Q5VWQ0 802 aaPredicted RBP8.35□□□□□ -1.07
NR1I3-222ENST00000506018 BAIAP2L2Q6UXY1 529 aa8.35□□□□□ -1.07
NR1I3-222ENST00000506018 LINC00299Q6ZSB3 139 aa8.35□□□□□ -1.07
NR1I3-222ENST00000506018 C1QL4Q86Z23 238 aa8.35□□□□□ -1.07
NR1I3-222ENST00000506018 SUMF2Q8NBJ7 301 aa8.35□□□□□ -1.07
NR1I3-222ENST00000506018 OR5AU1Q8NGC0 362 aa8.35□□□□□ -1.07
NR1I3-222ENST00000506018 OR4X2Q8NGF9 303 aa8.35□□□□□ -1.07
NR1I3-222ENST00000506018 OR13A1Q8NGR1 328 aa8.35□□□□□ -1.07
NR1I3-222ENST00000506018 OR10X1Q8NGY0 326 aa8.35□□□□□ -1.07
NR1I3-222ENST00000506018 MCFD2Q8NI22 146 aa8.35□□□□□ -1.07
NR1I3-222ENST00000506018 MRGPRDQ8TDS7 321 aa8.35□□□□□ -1.07
NR1I3-222ENST00000506018 CMTM3Q96MX0 182 aa8.35□□□□□ -1.07
NR1I3-222ENST00000506018 WNT10AQ9GZT5 417 aa8.35□□□□□ -1.07
NR1I3-222ENST00000506018 SPACA1Q9HBV2 294 aa8.35□□□□□ -1.07
NR1I3-222ENST00000506018 PEX16Q9Y5Y5 336 aa8.35□□□□□ -1.07
NR1I3-222ENST00000506018 ETV7Q9Y603 341 aa8.35□□□□□ -1.07
NR1I3-222ENST00000506018 CMYA5Q8N3K9 4069 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 A0A075B6Q4 140 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 SHISA3A0PJX4 238 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 BPNT1O95861 308 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 CLEC2LP0C7M8 214 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 PF4V1P10720 104 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 CD37P11049 281 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 CD24P25063 80 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 GDNFP39905 211 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 OR10A3P58181 314 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 HES1Q14469 280 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 LTC4SQ16873 150 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 SLC22A6Q4U2R8 563 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 ABCA11PQ4W5N1 156 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 AWAT2Q6E213 333 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 REC114Q7Z4M0 266 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 THNSL2Q86YJ6 484 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 OR8H3Q8N146 312 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 LYG1Q8N1E2 194 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 PHF21AQ96BD5 680 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 MRPS24Q96EL2 167 aaKnown RBP8.34□□□□□ -1.07
NR1I3-222ENST00000506018 CITED2Q99967 270 aaPredicted RBP8.34□□□□□ -1.07
NR1I3-222ENST00000506018 CST11Q9H112 138 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 LINC00574Q9H8X3 128 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 MOB4Q9Y3A3 225 aa8.34□□□□□ -1.07
NR1I3-222ENST00000506018 TCRBV4S1A1TA0A5B7 111 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 METTL21EPA6NDL7 271 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 MCRIP1C9JLW8 97 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 NPIPB11E5RHQ5 1161 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 LY6LH3BQJ8 138 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 GEMIN2O14893 280 aaKnown RBP8.33□□□□□ -1.08
NR1I3-222ENST00000506018 RGS5O15539 181 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 SCGNO76038 276 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 CGB3P0DN86 165 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 CGB7P0DN87 165 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 IL3RAP26951 378 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 GNG10P50151 68 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 C9orf152Q5JTZ5 239 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 HES5Q5TA89 166 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 RFESDQ8TAC1 157 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 KCNG3Q8TAE7 436 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 PLPPR1Q8TBJ4 325 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 ARL11Q969Q4 196 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 PTX4Q96A99 478 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 FAM3DQ96BQ1 224 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 SLIRPQ9GZT3 109 aaKnown RBP8.33□□□□□ -1.08
NR1I3-222ENST00000506018 C6orf62Q9GZU0 229 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-222ENST00000506018 RABL2AQ9UBK7 228 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-222ENST00000506018 SPATA2Q9UM82 520 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 RABL2BQ9UNT1 228 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 PSG11Q9UQ72 335 aa8.33□□□□□ -1.08
NR1I3-222ENST00000506018 MRPS28Q9Y2Q9 187 aaKnown RBP8.33□□□□□ -1.08
NR1I3-222ENST00000506018 TSSC4Q9Y5U2 329 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-222ENST00000506018 SMIM30A4D0T7 59 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 G3V4G9 280 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 SDCBPO00560 298 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-222ENST00000506018 ORC5O43913 435 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 PF4P02776 101 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 GAPDHP04406 335 aaKnown RBP8.32□□□□□ -1.08
NR1I3-222ENST00000506018 SNRNP70P08621 437 aaKnown RBP8.32□□□□□ -1.08
NR1I3-222ENST00000506018 TMEM11P17152 192 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 CD33P20138 364 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 SSTR5P35346 364 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 TALDO1P37837 337 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 TMEM95Q3KNT9 176 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 TMEM30BQ3MIR4 351 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 KHDC1LQ5JSQ8 128 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 C6orf183Q5T699 404 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 SAMD5Q5TGI4 173 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 TRAT1Q6PIZ9 186 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 GLIPR1L1Q6UWM5 242 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 Q6ZS46 218 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 OR2W3Q7Z3T1 314 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 OR52M1Q8NGK5 317 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 OR56B4Q8NH76 319 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 WIPF2Q8TF74 440 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-222ENST00000506018 URM1Q9BTM9 101 aaKnown RBP8.32□□□□□ -1.08
NR1I3-222ENST00000506018 NXF2Q9GZY0 626 aaKnown RBP8.32□□□□□ -1.08
NR1I3-222ENST00000506018 COMMD3Q9UBI1 195 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 RAB22AQ9UL26 194 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 TRAPPC2LQ9UL33 140 aa8.32□□□□□ -1.08
NR1I3-222ENST00000506018 NOTCH3Q9UM47 2321 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms