RNA–Protein interactions for RNA: ENST00000505976.5

OTUD4-206, Transcript of OTU deubiquitinase 4, human

TSL 5

Gene OTUD4, Length 671 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
OTUD4-206	ENST00000505976	THRSP	Q92748	146 aa		13.63	□□□□□ -0.23
OTUD4-206	ENST00000505976	RBMXL1	Q96E39	390 aa	Known RBP	13.63	□□□□□ -0.23
OTUD4-206	ENST00000505976	S1PR3	Q99500	378 aa		13.63	□□□□□ -0.23
OTUD4-206	ENST00000505976	P2RX4	Q99571	388 aa		13.63	□□□□□ -0.23
OTUD4-206	ENST00000505976	GNG12	Q9UBI6	72 aa		13.63	□□□□□ -0.23
OTUD4-206	ENST00000505976	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.62	□□□□□ -0.23
OTUD4-206	ENST00000505976	UBE2QL1	A1L167	161 aa		13.62	□□□□□ -0.23
OTUD4-206	ENST00000505976	PDCD6	O75340	191 aa		13.62	□□□□□ -0.23
OTUD4-206	ENST00000505976	MAPK3	P27361	379 aa	Predicted RBP	13.62	□□□□□ -0.23
OTUD4-206	ENST00000505976	HOXD3	P31249	432 aa	Predicted RBP	13.62	□□□□□ -0.23
OTUD4-206	ENST00000505976	MYCNOS	P40205	109 aa		13.62	□□□□□ -0.23
OTUD4-206	ENST00000505976	INSL4	Q14641	139 aa		13.62	□□□□□ -0.23
OTUD4-206	ENST00000505976	MORN2	Q502X0	79 aa		13.62	□□□□□ -0.23
OTUD4-206	ENST00000505976	C6orf141	Q5SZD1	244 aa		13.62	□□□□□ -0.23
OTUD4-206	ENST00000505976	STEAP3	Q658P3	488 aa		13.62	□□□□□ -0.23
OTUD4-206	ENST00000505976	KLHL30-AS1	Q8NEE0	82 aa		13.62	□□□□□ -0.23
OTUD4-206	ENST00000505976	MRPL30	Q8TCC3	161 aa	Known RBP	13.62	□□□□□ -0.23
OTUD4-206	ENST00000505976	TAF9B	Q9HBM6	251 aa		13.62	□□□□□ -0.23
OTUD4-206	ENST00000505976	GHRL	Q9UBU3	117 aa		13.62	□□□□□ -0.23
OTUD4-206	ENST00000505976	NUDT19	A8MXV4	375 aa		13.61	□□□□□ -0.23
OTUD4-206	ENST00000505976	LANCL1	O43813	399 aa		13.61	□□□□□ -0.23
OTUD4-206	ENST00000505976	F2RL1	P55085	397 aa		13.61	□□□□□ -0.23
OTUD4-206	ENST00000505976	GNMT	Q14749	295 aa		13.61	□□□□□ -0.23
OTUD4-206	ENST00000505976	PNLIPRP3	Q17RR3	467 aa		13.61	□□□□□ -0.23
OTUD4-206	ENST00000505976	FAM27D1	Q5T7N8	215 aa		13.61	□□□□□ -0.23
OTUD4-206	ENST00000505976	RNLS	Q5VYX0	342 aa		13.61	□□□□□ -0.23
OTUD4-206	ENST00000505976	TEX38	Q6PEX7	206 aa		13.61	□□□□□ -0.23
OTUD4-206	ENST00000505976	C5orf24	Q7Z6I8	188 aa		13.61	□□□□□ -0.23
OTUD4-206	ENST00000505976	ZNF554	Q86TJ5	538 aa		13.61	□□□□□ -0.23
OTUD4-206	ENST00000505976	RNF152	Q8N8N0	203 aa		13.61	□□□□□ -0.23
OTUD4-206	ENST00000505976	OR8H1	Q8NGG4	311 aa		13.61	□□□□□ -0.23
OTUD4-206	ENST00000505976	TFAP2C	Q92754	450 aa		13.61	□□□□□ -0.23
OTUD4-206	ENST00000505976	HSPB9	Q9BQS6	159 aa		13.61	□□□□□ -0.23
OTUD4-206	ENST00000505976	GPR61	Q9BZJ8	451 aa		13.61	□□□□□ -0.23
OTUD4-206	ENST00000505976	ERGIC3	Q9Y282	383 aa		13.61	□□□□□ -0.23
OTUD4-206	ENST00000505976		H0YHG0	523 aa		13.6	□□□□□ -0.23
OTUD4-206	ENST00000505976	CDK1	P06493	297 aa		13.6	□□□□□ -0.23
OTUD4-206	ENST00000505976	CFHR3	Q02985	330 aa		13.6	□□□□□ -0.23
OTUD4-206	ENST00000505976	LSAMP	Q13449	338 aa		13.6	□□□□□ -0.23
OTUD4-206	ENST00000505976	GPR50	Q13585	617 aa		13.6	□□□□□ -0.23
OTUD4-206	ENST00000505976	ACSM3	Q53FZ2	586 aa		13.6	□□□□□ -0.23
OTUD4-206	ENST00000505976	LRRTM1	Q86UE6	522 aa		13.6	□□□□□ -0.23
OTUD4-206	ENST00000505976	ZNF695	Q8IW36	515 aa		13.6	□□□□□ -0.23
OTUD4-206	ENST00000505976	ODF3L1	Q8IXM7	274 aa		13.6	□□□□□ -0.23
OTUD4-206	ENST00000505976	FAM46B	Q96A09	425 aa		13.6	□□□□□ -0.23
OTUD4-206	ENST00000505976	RASL11B	Q9BPW5	248 aa		13.6	□□□□□ -0.23
OTUD4-206	ENST00000505976	OR2S2	Q9NQN1	319 aa		13.6	□□□□□ -0.23
OTUD4-206	ENST00000505976	JPT1	Q9UK76	154 aa		13.6	□□□□□ -0.23
OTUD4-206	ENST00000505976	LSM2	Q9Y333	95 aa	Known RBP	13.6	□□□□□ -0.23
OTUD4-206	ENST00000505976	RPLP1	P05386	114 aa	Known RBP	13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	UBB	P0CG47	229 aa		13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	VSIG8	P0DPA2	414 aa		13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	CD37	P11049	281 aa		13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	CHAT	P28329	748 aa		13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	HTD2	P86397	168 aa		13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	GABPB1	Q06547	395 aa	Predicted RBP	13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	FOXE3	Q13461	319 aa		13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	C1orf100	Q5SVJ3	147 aa		13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	MS4A15	Q8N5U1	240 aa		13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	OR52L2P	Q8NGH6	319 aa		13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	RAX2	Q96IS3	184 aa		13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	DUX3	Q96PT4	197 aa		13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	SULT4A1	Q9BR01	284 aa		13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	MCRIP2	Q9BUT9	160 aa	Known RBP	13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	MND1	Q9BWT6	205 aa		13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	GON7	Q9BXV9	100 aa		13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	CST11	Q9H112	138 aa		13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	DCLRE1B	Q9H816	532 aa		13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	KCNIP1	Q9NZI2	227 aa		13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	ZNF580	Q9UK33	172 aa		13.59	□□□□□ -0.23
OTUD4-206	ENST00000505976	YPEL1	O60688	119 aa		13.58	□□□□□ -0.24
OTUD4-206	ENST00000505976	IGHG4	P01861	327 aa		13.58	□□□□□ -0.24
OTUD4-206	ENST00000505976	ELANE	P08246	267 aa		13.58	□□□□□ -0.24
OTUD4-206	ENST00000505976	PPP1CC	P36873	323 aa	Known RBP	13.58	□□□□□ -0.24
OTUD4-206	ENST00000505976	LY6G6F	Q5SQ64	297 aa		13.58	□□□□□ -0.24
OTUD4-206	ENST00000505976	OR10K2	Q6IF99	312 aa		13.58	□□□□□ -0.24
OTUD4-206	ENST00000505976	LCNL1	Q6ZST4	164 aa		13.58	□□□□□ -0.24
OTUD4-206	ENST00000505976	PHYHIP	Q92561	330 aa		13.58	□□□□□ -0.24
OTUD4-206	ENST00000505976	YPEL2	Q96QA6	119 aa		13.58	□□□□□ -0.24
OTUD4-206	ENST00000505976	ABHD14A	Q9BUJ0	271 aa		13.58	□□□□□ -0.24
OTUD4-206	ENST00000505976	CCL24	O00175	119 aa		13.57	□□□□□ -0.24
OTUD4-206	ENST00000505976	RRP9	O43818	475 aa	Known RBP	13.57	□□□□□ -0.24
OTUD4-206	ENST00000505976	IGF1	P05019	195 aa		13.57	□□□□□ -0.24
OTUD4-206	ENST00000505976	SOX6	P35712	828 aa		13.57	□□□□□ -0.24
OTUD4-206	ENST00000505976	CDX1	P47902	265 aa	Predicted RBP	13.57	□□□□□ -0.24
OTUD4-206	ENST00000505976	RPS27A	P62979	156 aa	Known RBP	13.57	□□□□□ -0.24
OTUD4-206	ENST00000505976	UNC119	Q13432	240 aa		13.57	□□□□□ -0.24
OTUD4-206	ENST00000505976	HMGN3	Q15651	99 aa		13.57	□□□□□ -0.24
OTUD4-206	ENST00000505976	CXorf66	Q5JRM2	361 aa	Predicted RBP	13.57	□□□□□ -0.24
OTUD4-206	ENST00000505976	DPF1	Q92782	380 aa		13.57	□□□□□ -0.24
OTUD4-206	ENST00000505976	NEDD4L	Q96PU5	975 aa		13.57	□□□□□ -0.24
OTUD4-206	ENST00000505976	NABP2	Q9BQ15	211 aa		13.57	□□□□□ -0.24
OTUD4-206	ENST00000505976	TMED9	Q9BVK6	235 aa		13.57	□□□□□ -0.24
OTUD4-206	ENST00000505976	TM2D1	Q9BX74	207 aa		13.57	□□□□□ -0.24
OTUD4-206	ENST00000505976	KCNK15	Q9H427	330 aa		13.57	□□□□□ -0.24
OTUD4-206	ENST00000505976	COL7A1	Q02388	2944 aa		13.57	□□□□□ -0.24
OTUD4-206	ENST00000505976	HTR2C	P28335	458 aa		13.56	□□□□□ -0.24
OTUD4-206	ENST00000505976	QRFP	P83859	136 aa		13.56	□□□□□ -0.24
OTUD4-206	ENST00000505976	IRF3	Q14653	427 aa		13.56	□□□□□ -0.24
OTUD4-206	ENST00000505976	KIR2DS1	Q14954	304 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms