RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 FRRS1LQ9P0K9 344 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 IFITM10A6NMD0 228 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 RAF1P04049 648 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 CIRBPQ14011 172 aaKnown RBP4.51□□□□□ -1.69
MATR3-211ENST00000505625 FAAP20Q6NZ36 180 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 C15orf53Q8NAA6 179 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 OR1K1Q8NGR3 316 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 RXFP4Q8TDU9 374 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 ZNF768Q9H5H4 540 aaKnown RBP4.51□□□□□ -1.69
MATR3-211ENST00000505625 WIPI2Q9Y4P8 454 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 A0A096LPF7 62 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 SNRPGP15A8MWD9 76 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 IGLV2-23P01705 113 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 P01737 135 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 HOXD4P09016 255 aaPredicted RBP4.51□□□□□ -1.69
MATR3-211ENST00000505625 ARRB2P32121 409 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 MDH2P40926 338 aaKnown RBP4.51□□□□□ -1.69
MATR3-211ENST00000505625 UCP2P55851 309 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 RAC3P60763 192 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 PDZK1IP1Q13113 114 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 FBXW9Q5XUX1 488 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 FAM122BQ7Z309 247 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 ARIH2OSQ8N7S6 290 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 OR2D3Q8NGH3 330 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 DDA1Q9BW61 102 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 MRPL13Q9BYD1 178 aaKnown RBP4.51□□□□□ -1.69
MATR3-211ENST00000505625 FLRT3Q9NZU0 649 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 DNAJC15Q9Y5T4 150 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 KLF7O75840 302 aaPredicted RBP4.51□□□□□ -1.69
MATR3-211ENST00000505625 CD8AP01732 235 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 PTBP1P26599 531 aaKnown RBP eCLIP4.51□□□□□ -1.69
MATR3-211ENST00000505625 ACP7Q6ZNF0 438 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 DMRTC2Q8IXT2 367 aaPredicted RBP4.51□□□□□ -1.69
MATR3-211ENST00000505625 PRSS27Q9BQR3 290 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 CST9LQ9H4G1 147 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 AURKAIP1Q9NWT8 199 aaPredicted RBP4.51□□□□□ -1.69
MATR3-211ENST00000505625 LRP12Q9Y561 859 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 LOC285095A0A1B0GVY8 99 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 PPP6CO00743 305 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 TSPAN31Q12999 210 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 TEX30Q5JUR7 227 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 INO80CQ6PI98 192 aaPredicted RBP4.51□□□□□ -1.69
MATR3-211ENST00000505625 C6orf201Q7Z4U5 140 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 OR5AN1Q8NGI8 311 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 GSX2Q9BZM3 304 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 GPR27Q9NS67 375 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 TECRQ9NZ01 308 aaKnown RBP4.51□□□□□ -1.69
MATR3-211ENST00000505625 ZNF107Q9UII5 783 aaPredicted RBP4.51□□□□□ -1.69
MATR3-211ENST00000505625 UBR3Q6ZT12 1888 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 FOXI3A8MTJ6 420 aaPredicted RBP4.5□□□□□ -1.69
MATR3-211ENST00000505625 ZNF727A8MUV8 499 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 B9A039 149 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 MFNGO00587 321 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 LMX1BO60663 402 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 LGALS3P17931 250 aaKnown RBP4.5□□□□□ -1.69
MATR3-211ENST00000505625 SLC6A1P30531 599 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 RBMS2Q15434 407 aaKnown RBP4.5□□□□□ -1.69
MATR3-211ENST00000505625 GABRA6Q16445 453 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 TMEM183BQ1AE95 376 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 LRRC75BQ2VPJ9 315 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 ZNF324BQ6AW86 544 aaPredicted RBP4.5□□□□□ -1.69
MATR3-211ENST00000505625 OR10R2Q8NGX6 335 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 NUDCD2Q8WVJ2 157 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 YIPF5Q969M3 257 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 A4GALTQ9NPC4 353 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 ELOVL5Q9NYP7 299 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 ZNF629Q9UEG4 869 aaPredicted RBP4.5□□□□□ -1.69
MATR3-211ENST00000505625 SPTBP11277 2137 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 TMEM129A0AVI4 362 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 SDHDO14521 159 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 TGOLN2O43493 480 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 S1PR2O95136 353 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 ALPLP05186 524 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 DEFB130BP0DP73 79 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 DEFB130AP0DP74 79 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 CKS1BP61024 79 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 Q499Y3 187 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 Q6ZSR9 355 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 Q9HAA7 133 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 PLEKHB1Q9UF11 243 aaPredicted RBP4.5□□□□□ -1.69
MATR3-211ENST00000505625 KNTC1P50748 2209 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 C1QL4Q86Z23 238 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 TMEM167AQ8TBQ9 72 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 CHCHD5Q9BSY4 110 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 EVA1AQ9H8M9 152 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 SIRT4Q9Y6E7 314 aaPredicted RBP4.5□□□□□ -1.69
MATR3-211ENST00000505625 A0A1W2PPC1 479 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 LYRM1O43325 122 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 ALDOCP09972 364 aaKnown RBP4.5□□□□□ -1.69
MATR3-211ENST00000505625 GPR183P32249 361 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 NPC2P61916 151 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 B4GALNT1Q00973 533 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 RNF212Q495C1 297 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 GTF2H5Q6ZYL4 71 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 SSU72Q9NP77 194 aaKnown RBP4.5□□□□□ -1.69
MATR3-211ENST00000505625 ARFGEF1Q9Y6D6 1849 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 DOCK7Q96N67 2140 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 TRAV8-7A0A075B6U6 113 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 TRAV12-3A0A0B4J271 114 aa4.5□□□□□ -1.69
MATR3-211ENST00000505625 TMEM189A5PLL7 270 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms