RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 RFESDQ8TAC1 157 aa7.7□□□□□ -1.18
NEDD9-210ENST00000505589 MYOZ3Q8TDC0 251 aa7.7□□□□□ -1.18
NEDD9-210ENST00000505589 MRGPRDQ8TDS7 321 aa7.7□□□□□ -1.18
NEDD9-210ENST00000505589 RTN4IP1Q8WWV3 396 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-210ENST00000505589 DCUN1D4Q92564 292 aa7.7□□□□□ -1.18
NEDD9-210ENST00000505589 ADAT3Q96EY9 351 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-210ENST00000505589 PPIL3Q9H2H8 161 aaKnown RBP7.7□□□□□ -1.18
NEDD9-210ENST00000505589 ZCCHC4Q9H5U6 513 aa7.7□□□□□ -1.18
NEDD9-210ENST00000505589 EDA2RQ9HAV5 297 aa7.7□□□□□ -1.18
NEDD9-210ENST00000505589 PLSCR3Q9NRY6 295 aa7.7□□□□□ -1.18
NEDD9-210ENST00000505589 ZNF107Q9UII5 783 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-210ENST00000505589 RNF150Q9ULK6 438 aa7.7□□□□□ -1.18
NEDD9-210ENST00000505589 EXOSC1Q9Y3B2 195 aaKnown RBP7.7□□□□□ -1.18
NEDD9-210ENST00000505589 SMIM31A0A1B0GVY4 71 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 H0Y980 276 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 MYL12BO14950 172 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 HSPA12AO43301 675 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 PITPNAQ00169 270 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 DIAPH2-AS1Q14236 149 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 CDK5R1Q15078 307 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 KISS1Q15726 138 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 LTC4SQ16873 150 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 PYHIN1Q6K0P9 492 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 ZNF367Q7RTV3 350 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 GPR141Q7Z602 305 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 LINC00596Q86U02 117 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 PRSS35Q8N3Z0 413 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 OR10H4Q8NGA5 316 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 OR13F1Q8NGS4 319 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 OR13C3Q8NGS6 347 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 OR2G2Q8NGZ5 317 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 LEAP2Q969E1 77 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 RFT1Q96AA3 541 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 S100A13Q99584 98 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 TBX5Q99593 518 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 MND1Q9BWT6 205 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 FAM192AQ9GZU8 254 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 CST11Q9H112 138 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 NDUFA13Q9P0J0 144 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 GNG8Q9UK08 70 aa7.69□□□□□ -1.18
NEDD9-210ENST00000505589 LSM2Q9Y333 95 aaKnown RBP7.69□□□□□ -1.18
NEDD9-210ENST00000505589 STAB2Q8WWQ8 2551 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 CSMD3Q7Z407 3707 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 IGHV3-72A0A0B4J1Y9 119 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 IGKV1-12A0A0C4DH73 117 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 TMEM30CPA0ZSE6 113 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 SDCBPO00560 298 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-210ENST00000505589 SPINT2O43291 252 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 IGKV1D-12P01611 117 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 IGLV1-40P01703 118 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 HSPB1P04792 205 aaKnown RBP7.68□□□□□ -1.18
NEDD9-210ENST00000505589 LIMS3P0CW19 117 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 LIMS4P0CW20 117 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 IGHV4-30-4P0DP06 118 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 PSMB9P28065 219 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 REG1BP48304 166 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 ETV1P50549 477 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 RSU1Q15404 277 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 MMDQ15546 238 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 SRSF7Q16629 238 aaKnown RBP eCLIP7.68□□□□□ -1.18
NEDD9-210ENST00000505589 TATDN3Q17R31 274 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 SYT6Q5T7P8 510 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-210ENST00000505589 RSBN1Q5VWQ0 802 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-210ENST00000505589 LIN54Q6MZP7 749 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 FDX2Q6P4F2 183 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 ADAMTSL5Q6ZMM2 481 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 ANKRD13BQ86YJ7 626 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 ACBD7Q8N6N7 88 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 OR13C9Q8NGT0 318 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 ARL11Q969Q4 196 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 GPER1Q99527 375 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 ZNF251Q9BRH9 671 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 RBM38Q9H0Z9 239 aaKnown RBP7.68□□□□□ -1.18
NEDD9-210ENST00000505589 TUBA4BQ9H853 241 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 ERVK13-1Q9NX77 482 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 GFOD1Q9NXC2 390 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 KIAA1456Q9P272 454 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 CLEC2DQ9UHP7 191 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 STUB1Q9UNE7 303 aa7.68□□□□□ -1.18
NEDD9-210ENST00000505589 TRAV41A0A0B4J266 112 aa7.67□□□□□ -1.18
NEDD9-210ENST00000505589 TRAV24A0A0B4J272 114 aa7.67□□□□□ -1.18
NEDD9-210ENST00000505589 FAM90A10PA6NDY2 464 aa7.67□□□□□ -1.18
NEDD9-210ENST00000505589 HSPB6O14558 160 aa7.67□□□□□ -1.18
NEDD9-210ENST00000505589 SULT1B1O43704 296 aa7.67□□□□□ -1.18
NEDD9-210ENST00000505589 ZNF780AO75290 641 aaPredicted RBP7.67□□□□□ -1.18
NEDD9-210ENST00000505589 HLA-DRB1P01911 266 aa7.67□□□□□ -1.18
NEDD9-210ENST00000505589 ZNF137PP52743 207 aa7.67□□□□□ -1.18
NEDD9-210ENST00000505589 F2RL1P55085 397 aa7.67□□□□□ -1.18
NEDD9-210ENST00000505589 WNT4P56705 351 aa7.67□□□□□ -1.18
NEDD9-210ENST00000505589 MRPL28Q13084 256 aaKnown RBP7.67□□□□□ -1.18
NEDD9-210ENST00000505589 TRAT1Q6PIZ9 186 aa7.67□□□□□ -1.18
NEDD9-210ENST00000505589 SLC25A48Q6ZT89 311 aaKnown RBP7.67□□□□□ -1.18
NEDD9-210ENST00000505589 SSX6Q7RTT6 188 aa7.67□□□□□ -1.18
NEDD9-210ENST00000505589 GTSCR1Q86UQ5 136 aa7.67□□□□□ -1.18
NEDD9-210ENST00000505589 NANOGP1Q8N7R0 232 aa7.67□□□□□ -1.18
NEDD9-210ENST00000505589 TMEM104Q8NE00 496 aa7.67□□□□□ -1.18
NEDD9-210ENST00000505589 OR5D18Q8NGL1 313 aa7.67□□□□□ -1.18
NEDD9-210ENST00000505589 OR52N1Q8NH53 320 aa7.67□□□□□ -1.18
NEDD9-210ENST00000505589 DLX4Q92988 240 aaPredicted RBP7.67□□□□□ -1.18
NEDD9-210ENST00000505589 HSPB9Q9BQS6 159 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms