RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 KIR2DS4P43632 304 aa10.1□□□□□ -0.79
UBE3D-206ENST00000505226 KIR2DS1Q14954 304 aa10.1□□□□□ -0.79
UBE3D-206ENST00000505226 CABLES2Q9BTV7 478 aa10.1□□□□□ -0.79
UBE3D-206ENST00000505226 CEBPZOSA8MTT3 80 aa10.1□□□□□ -0.79
UBE3D-206ENST00000505226 SERPINE2P07093 398 aa10.1□□□□□ -0.79
UBE3D-206ENST00000505226 GZMHP20718 246 aa10.1□□□□□ -0.79
UBE3D-206ENST00000505226 IGFBP4P22692 258 aa10.1□□□□□ -0.79
UBE3D-206ENST00000505226 DDTP30046 118 aa10.1□□□□□ -0.79
UBE3D-206ENST00000505226 CD81P60033 236 aa10.1□□□□□ -0.79
UBE3D-206ENST00000505226 ARF1P84077 181 aaKnown RBP10.1□□□□□ -0.79
UBE3D-206ENST00000505226 HLA-BQ31612 363 aa10.1□□□□□ -0.79
UBE3D-206ENST00000505226 IL1F10Q8WWZ1 152 aa10.1□□□□□ -0.79
UBE3D-206ENST00000505226 GTF3AQ92664 365 aaKnown RBP10.1□□□□□ -0.79
UBE3D-206ENST00000505226 LRFN1Q9P244 771 aa10.1□□□□□ -0.79
UBE3D-206ENST00000505226 SYNGR2O43760 224 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 ELLP55199 621 aaPredicted RBP10.09□□□□□ -0.79
UBE3D-206ENST00000505226 ZNF585BQ52M93 769 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 FAM180AQ6UWF9 173 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 CLDN23Q96B33 292 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 RAB40CQ96S21 281 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 R4GN57 208 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 TRAPPC2LH3BP13 241 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 HMGB3O15347 200 aaKnown RBP10.09□□□□□ -0.79
UBE3D-206ENST00000505226 MDH2P40926 338 aaKnown RBP10.09□□□□□ -0.79
UBE3D-206ENST00000505226 PNRC1Q12796 327 aaPredicted RBP10.09□□□□□ -0.79
UBE3D-206ENST00000505226 LRRC75BQ2VPJ9 315 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 ZDHHC23Q8IYP9 409 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 RPP25LQ8N5L8 163 aaKnown RBP10.09□□□□□ -0.79
UBE3D-206ENST00000505226 NECAP1Q8NC96 275 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 OR10J5Q8NHC4 309 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 KCNE4Q8WWG9 221 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 OR4C12Q96R67 309 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 DUSP23Q9BVJ7 150 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 PSENENQ9NZ42 101 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 PPP1R3CQ9UQK1 317 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 TNRC6AQ8NDV7 1962 aaKnown RBP10.09□□□□□ -0.79
UBE3D-206ENST00000505226 CYTIPO60759 359 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 CNOT4O95628 575 aaKnown RBP10.09□□□□□ -0.79
UBE3D-206ENST00000505226 CYC1P08574 325 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 FOSL1P15407 271 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 COL10A1Q03692 680 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 TESK1Q15569 626 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 SAXO1Q8IYX7 474 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 SPEM1Q8N4L4 309 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 OR2Y1Q8NGV0 311 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 SCGB1C1Q8TD33 95 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 PLK3Q9H4B4 646 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 PCSK5Q92824 1860 aa10.09□□□□□ -0.79
UBE3D-206ENST00000505226 TNRC6BQ9UPQ9 1833 aaKnown RBP10.09□□□□□ -0.79
UBE3D-206ENST00000505226 A0A087X0M5 115 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 A0A1B0GX30 115 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 C9J4A7 227 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 RHBDL1O75783 438 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 PFN1P07737 140 aaKnown RBP10.08□□□□□ -0.8
UBE3D-206ENST00000505226 CTXN2P0C2S0 81 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 PAX1P15863 534 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 PKIAP61925 76 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 IL11RAQ14626 422 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 PRSS8Q16651 343 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 CLEC12BQ2HXU8 276 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 REC114Q7Z4M0 266 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 GATAD1Q8WUU5 269 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 UFSP2Q9NUQ7 469 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 VAX2Q9UIW0 290 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 COL6A3P12111 3177 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 AMBPP02760 352 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 P04436 131 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 GZMBP10144 247 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 SLC25A6P12236 298 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 NDUFB7P17568 137 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 PRR18Q8N4B5 295 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 IFI44Q8TCB0 444 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 MAP1LC3B2A6NCE7 125 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 GALR2O43603 387 aaPredicted RBP10.08□□□□□ -0.8
UBE3D-206ENST00000505226 GFRA1P56159 465 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 RTP5Q14D33 572 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 C16orf82Q7Z2V1 217 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 MKXQ8IYA7 352 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 PSMG3Q9BT73 122 aaPredicted RBP10.08□□□□□ -0.8
UBE3D-206ENST00000505226 ELOVL1Q9BW60 279 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 MAP1LC3BQ9GZQ8 125 aa10.08□□□□□ -0.8
UBE3D-206ENST00000505226 WDR61Q9GZS3 305 aaKnown RBP10.08□□□□□ -0.8
UBE3D-206ENST00000505226 MED12LQ86YW9 2145 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 A0A1W2PR80 420 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 SS18L1O75177 396 aaPredicted RBP10.07□□□□□ -0.8
UBE3D-206ENST00000505226 ZNF737O75373 536 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 OPN1MWP04001 364 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 OPN1MW2P0DN77 364 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 OPN1MW3P0DN78 364 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 P2RY6Q15077 328 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 ADIRFQ15847 76 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 SPANXN5Q5MJ07 72 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 MRPL21Q7Z2W9 205 aaKnown RBP10.07□□□□□ -0.8
UBE3D-206ENST00000505226 MRGPRGQ86SM5 289 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 OR10A7Q8NGE5 316 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 RNASE11Q8TAA1 199 aaKnown RBP10.07□□□□□ -0.8
UBE3D-206ENST00000505226 PSMF1Q92530 271 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 SGCZQ96LD1 299 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 DLL3Q9NYJ7 618 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 PITPNC1Q9UKF7 332 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms