RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 NPRL2Q8WTW4 380 aa4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 HPSE2Q8WWQ2 592 aa4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 ST8SIA4Q92187 359 aa4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 GTF3AQ92664 365 aaKnown RBP4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 RNF125Q96EQ8 232 aa4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 RADILQ96JH8 1075 aa4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 RNF170Q96K19 258 aa4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 NEDD4LQ96PU5 975 aa4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 SPACA5Q96QH8 159 aa4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 SLC25A21Q9BQT8 299 aaPredicted RBP4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 CACNG6Q9BXT2 260 aa4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 SELENOIQ9C0D9 397 aa4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 OR2J1Q9GZK6 312 aa4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 KCNK15Q9H427 330 aa4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 ELL3Q9HB65 397 aaPredicted RBP4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 HRASLSQ9HDD0 168 aa4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 TMEM100Q9NV29 134 aa4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 SLC2A8Q9NY64 477 aa4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 COQ3Q9NZJ6 369 aa4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 KLK11Q9UBX7 282 aa4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 PURGQ9UJV8 347 aaKnown RBP4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 CFAP47Q6ZTR5 3102 aa4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 CELSR3Q9NYQ7 3312 aa4.02□□□□□ -1.77
DEPDC1B-203ENST00000505017 ACACBO00763 2458 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 DIDO1Q9BTC0 2240 aaKnown RBP4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 IGLV3-9A0A075B6K5 115 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 A0A0A6YYD4 124 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 TRGV8A0A0C4DH27 118 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 LINC00854A0A1B0GVQ3 168 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 A0A1W2PR80 420 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 MED19A0JLT2 244 aaPredicted RBP4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 MEIOCA2RUB1 952 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 C7orf66A4D0T2 115 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 TMEM235A6NFC5 223 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 ZNF736B4DX44 427 aaPredicted RBP4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 ZNF732B4DXR9 585 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 DISC1C4P0D8 188 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 INMT-MINDY4F8WBC2 141 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 HS3ST1O14792 307 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 SOCS1O15524 211 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 TIMM8AO60220 97 aaPredicted RBP4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 PDCD6O75340 191 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 NDUFB6O95139 128 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 RAB3DO95716 219 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 PTBP3O95758 552 aaKnown RBP4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 IGHV3-13P01766 116 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 TCRBP04435 133 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 IL5P05113 134 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 SPNP16150 400 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 SERPINA2P20848 420 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 FUT3P21217 361 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 CA6P23280 308 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 BTCP35070 178 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 CFHR2P36980 270 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 HAAOP46952 286 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 ZNF83P51522 516 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 GPM6AP51674 278 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 TMEM50BP56557 158 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 TAS2R46P59540 309 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 VAMP2P63027 116 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 MRPS15P82914 257 aaKnown RBP4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 PSG7Q13046 419 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 MADCAM1Q13477 382 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 ARFRP1Q13795 201 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 CDK10Q15131 360 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 OR8G1Q15617 311 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 TSC22D1Q15714 1073 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 MOGAT2Q3SYC2 334 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 PRR30Q53SZ7 412 aaPredicted RBP4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 RNASE10Q5GAN6 216 aaKnown RBP4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 VAX1Q5SQQ9 334 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 RSBN1Q5VWQ0 802 aaPredicted RBP4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 SHEQ5VZ18 495 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 STEAP1BQ6NZ63 245 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 FIP1L1Q6UN15 594 aaKnown RBP4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 SLC25A26Q70HW3 274 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 TRAPPC6BQ86SZ2 158 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 TMEM17Q86X19 198 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 ARRDC1Q8N5I2 433 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 OR5D18Q8NGL1 313 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 OR4C16Q8NGL9 310 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 OR10Z1Q8NGY1 313 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 LILRB4Q8NHJ6 448 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 RNASE6Q93091 150 aaKnown RBP4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 ARHGAP5-AS1Q96IT6 56 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 SCGB3A2Q96PL1 93 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 PRRT1Q99946 306 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 ADAT1Q9BUB4 502 aaKnown RBP4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 PECRQ9BY49 303 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 ALX4Q9H161 411 aaPredicted RBP4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 TLNRD1Q9H1K6 362 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 CXXC4Q9H2H0 198 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 OR51I2Q9H344 312 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 RIMS4Q9H426 269 aaPredicted RBP4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 BANF2Q9H503 90 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 ZNF442Q9H7R0 627 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 MYOZ1Q9NP98 299 aaPredicted RBP4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 IFT46Q9NQC8 304 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 PLEKHJ1Q9NW61 149 aa4.01□□□□□ -1.77
DEPDC1B-203ENST00000505017 RCC2Q9P258 522 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms