RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 MADCAM1Q13477 382 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 EIF4EBP1Q13541 118 aaPredicted RBP4□□□□□ -1.77
LMNB1-208ENST00000504788 DIAPH2-AS1Q14236 149 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 HABP2Q14520 560 aaPredicted RBP4□□□□□ -1.77
LMNB1-208ENST00000504788 ARL6IP1Q15041 203 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 BAK1Q16611 211 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 Q3ZCU0 254 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 CT45A1Q5HYN5 189 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 PRAMEF5Q5TYX0 476 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 METTL11BQ5VVY1 283 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 OR52W1Q6IF63 320 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 FAHD2BQ6P2I3 314 aaPredicted RBP4□□□□□ -1.77
LMNB1-208ENST00000504788 MZT2AQ6P582 158 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 CLEC9AQ6UXN8 241 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 ZNF782Q6ZMW2 699 aaPredicted RBP4□□□□□ -1.77
LMNB1-208ENST00000504788 SLC25A48Q6ZT89 311 aaKnown RBP4□□□□□ -1.77
LMNB1-208ENST00000504788 IL17RELQ6ZVW7 336 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 MOB1BQ7L9L4 216 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 OVCH2Q7RTZ1 564 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 FAM185AQ8N0U4 392 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 BCL6BQ8N143 479 aaPredicted RBP4□□□□□ -1.77
LMNB1-208ENST00000504788 LINC00311Q8N616 119 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 BEND2Q8NDZ0 799 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 OR52I2Q8NH67 350 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 CT45A3Q8NHU0 189 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 ARL11Q969Q4 196 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 FAHD2AQ96GK7 314 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 DIRAS2Q96HU8 199 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 YPEL2Q96QA6 119 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 SRRQ9GZT4 340 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 C6orf62Q9GZU0 229 aaPredicted RBP4□□□□□ -1.77
LMNB1-208ENST00000504788 IFI27L2Q9H2X8 130 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 DIABLOQ9NR28 239 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 IDI2-AS1Q9NZ38 188 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 OR1A1Q9P1Q5 309 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 ZNF69Q9UC07 566 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 ANXA10Q9UJ72 324 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 PSG11Q9UQ72 335 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 AUP1Q9Y679 476 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 SESN1Q9Y6P5 492 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 JMJD1CQ15652 2540 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 TENM1Q9UKZ4 2725 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 IGHV3-43A0A0B4J1X8 118 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 IGHV1-69DA0A0B4J2H0 117 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 KRTAP9-6A0A140TA67 174 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 A0A1W2PQ09 198 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 FUOMA2VDF0 154 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 MEIS3P1A6NDR6 274 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 TRDCB7Z8K6 153 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 GABARAPH6UMI1 98 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 J3QR06 171 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 SULT1C2O00338 296 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 ITGB1BP1O14713 200 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 RGS5O15539 181 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 FABP7O15540 132 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 NOL3O60936 208 aaKnown RBP4□□□□□ -1.77
LMNB1-208ENST00000504788 CRLF1O75462 422 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 IGHV1-69P01742 117 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 CD74P04233 296 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 LPLP06858 475 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 IGHV3-43DP0DP04 118 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 PAX6P26367 422 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 PTBP1P26599 531 aaKnown RBP eCLIP4□□□□□ -1.77
LMNB1-208ENST00000504788 SAA4P35542 130 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 GLP1RP43220 463 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 IFITM3Q01628 133 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 HLA-DRB5Q30154 266 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 AADACL3Q5VUY0 350 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 STEAP3Q658P3 488 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 RUSC1-AS1Q66K80 236 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 PYHIN1Q6K0P9 492 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 TRAT1Q6PIZ9 186 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 BTNL3Q6UXE8 466 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 BRD3OSQ6XYD6 125 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 LHFPL4Q7Z7J7 247 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 LHFPL1Q86WI0 220 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 LURAP1LQ8IV03 231 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 H1FOOQ8IZA3 346 aaPredicted RBP4□□□□□ -1.77
LMNB1-208ENST00000504788 OR52L2PQ8NGH6 319 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 OR4D10Q8NGI6 311 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 OR4A4PQ8NGN8 299 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 LEAP2Q969E1 77 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 RBMXL1Q96E39 390 aaKnown RBP4□□□□□ -1.77
LMNB1-208ENST00000504788 PCGF1Q9BSM1 259 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 GAL3ST2Q9H3Q3 398 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 SCPEP1Q9HB40 452 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 ONECUT1Q9UBC0 465 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 JPT1Q9UK76 154 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 TRAPPC2LQ9UL33 140 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 KCNS2Q9ULS6 477 aa4□□□□□ -1.77
LMNB1-208ENST00000504788 ATRQ13535 2644 aa3.99□□□□□ -1.77
LMNB1-208ENST00000504788 DNHD1Q96M86 4753 aa3.99□□□□□ -1.77
LMNB1-208ENST00000504788 IGKV1D-13A0A0B4J2D9 117 aa3.99□□□□□ -1.77
LMNB1-208ENST00000504788 FAM172BPA6NC97 362 aa3.99□□□□□ -1.77
LMNB1-208ENST00000504788 IGKV1-13P0DP09 117 aa3.99□□□□□ -1.77
LMNB1-208ENST00000504788 PRSS3P35030 304 aa3.99□□□□□ -1.77
LMNB1-208ENST00000504788 PPP1CCP36873 323 aaKnown RBP3.99□□□□□ -1.77
LMNB1-208ENST00000504788 BRWD1-AS2P59051 145 aa3.99□□□□□ -1.77
LMNB1-208ENST00000504788 KLF9Q13886 244 aaPredicted RBP3.99□□□□□ -1.77
LMNB1-208ENST00000504788 TMEM30BQ3MIR4 351 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms