RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 HTD2P86397 168 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 MEF2CQ06413 473 aaPredicted RBP8.56□□□□□ -1.04
TPM3-217ENST00000504663 PPP1R1AQ13522 171 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 EIF4EBP1Q13541 118 aaPredicted RBP8.56□□□□□ -1.04
TPM3-217ENST00000504663 ZNF626Q68DY1 528 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 TRAT1Q6PIZ9 186 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 MUC20Q8N307 709 aaPredicted RBP8.56□□□□□ -1.04
TPM3-217ENST00000504663 ZNF439Q8NDP4 499 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 OR52L2PQ8NGH6 319 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 OR6F1Q8NGZ6 308 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 C8orf46Q8TAG6 207 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 PATZ1Q9HBE1 687 aaKnown RBP8.56□□□□□ -1.04
TPM3-217ENST00000504663 RDH8Q9NYR8 311 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 LINC00312Q9Y6C7 94 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 ABCA12Q86UK0 2595 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 SPG11Q96JI7 2443 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 IGHV3-43A0A0B4J1X8 118 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 KBTBD11-OT1A0A1B0GTJ5 212 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 RNF223E7ERA6 249 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 PPIHO43447 177 aaKnown RBP8.55□□□□□ -1.04
TPM3-217ENST00000504663 NDUFB3O43676 98 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 DHFRP00374 187 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 OR4E1P0C645 316 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 TRAPPC2P0DI81 140 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 TRAPPC2BP0DI82 140 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 IGHV3-43DP0DP04 118 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 CCL3L1P16619 93 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 GNRHRP30968 328 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 PPP1CCP36873 323 aaKnown RBP8.55□□□□□ -1.04
TPM3-217ENST00000504663 ERVFRD-1P60508 538 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 RELBQ01201 579 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 PAX2Q02962 417 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 KCNJ8Q15842 424 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 C2orf68Q2NKX9 166 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 WDR25Q64LD2 544 aaPredicted RBP8.55□□□□□ -1.04
TPM3-217ENST00000504663 TMEM200BQ69YZ2 307 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 TMEM17Q86X19 198 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 PRR18Q8N4B5 295 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 LY6G5BQ8NDX9 201 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 RFESDQ8TAC1 157 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 ARL11Q969Q4 196 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 NEIL1Q96FI4 390 aaPredicted RBP8.55□□□□□ -1.04
TPM3-217ENST00000504663 AGMATQ9BSE5 352 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 OR51J1Q9H342 316 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 OR6C3Q9NZP0 311 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 CLN8Q9UBY8 286 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 ZNF69Q9UC07 566 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 UBE2J1Q9Y385 318 aaPredicted RBP8.55□□□□□ -1.04
TPM3-217ENST00000504663 OR2W1Q9Y3N9 320 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 DOCK11Q5JSL3 2073 aa8.55□□□□□ -1.04
TPM3-217ENST00000504663 ARHGAP32A7KAX9 2087 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 A0A096LNT2 108 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 C9orf170A2RU37 121 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 HMX3A6NHT5 357 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 ZNF729A6NN14 1252 aaPredicted RBP8.54□□□□□ -1.04
TPM3-217ENST00000504663 SNRPGP15A8MWD9 76 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 SLC31A2O15432 143 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 IGHV2-5P01817 119 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 RLN1P04808 185 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 ZNF728P0DKX0 622 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 SULT1A3P0DMM9 295 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 SULT1A4P0DMN0 295 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 NDUFB7P17568 137 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 OMGP23515 440 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 ECI1P42126 302 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 GPR6P46095 362 aaPredicted RBP8.54□□□□□ -1.04
TPM3-217ENST00000504663 FXYD4P59646 89 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 UBE2MP61081 183 aaKnown RBP8.54□□□□□ -1.04
TPM3-217ENST00000504663 RND3P61587 244 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 LMO4P61968 165 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 RRAS2P62070 204 aaPredicted RBP8.54□□□□□ -1.04
TPM3-217ENST00000504663 RPL31P62899 125 aaKnown RBP8.54□□□□□ -1.04
TPM3-217ENST00000504663 DHRS2Q13268 280 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 FCN2Q15485 313 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 LRRC10Q5BKY1 277 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 PRAMEF5Q5TYX0 476 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 ZNF787Q6DD87 383 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 FAHD2BQ6P2I3 314 aaPredicted RBP8.54□□□□□ -1.04
TPM3-217ENST00000504663 ZNF818PQ6ZRF7 136 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 C1orf229Q6ZS94 237 aaPredicted RBP8.54□□□□□ -1.04
TPM3-217ENST00000504663 TMED4Q7Z7H5 227 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 KRTAP1-3Q8IUG1 177 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 OR11H7Q8NGC8 314 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 C10orf105Q8TEF2 133 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 IL1F10Q8WWZ1 152 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 RAB1CQ92928 201 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 FAHD2AQ96GK7 314 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 ST6GAL2Q96JF0 529 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 GSX2Q9BZM3 304 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 BPESC1Q9GZL8 116 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 IFI27L2Q9H2X8 130 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 CCL28Q9NRJ3 127 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 GFOD1Q9NXC2 390 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 TAS2R3Q9NYW6 316 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 MIOXQ9UGB7 285 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 JPT1Q9UK76 154 aa8.54□□□□□ -1.04
TPM3-217ENST00000504663 ANKRD17O75179 2603 aaKnown RBP8.53□□□□□ -1.04
TPM3-217ENST00000504663 AKAP9Q99996 3911 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 CSMD1Q96PZ7 3565 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 PDZD2O15018 2839 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms