RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 TMEM133Q9H2Q1 129 aa8.18□□□□□ -1.1
NUP54-203ENST00000504173 ZNF230Q9UIE0 474 aaPredicted RBP8.18□□□□□ -1.1
NUP54-203ENST00000504173 NUP50Q9UKX7 468 aa8.18□□□□□ -1.1
NUP54-203ENST00000504173 BIRC6Q9NR09 4857 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 IGHV2-26A0A0B4J1V2 119 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 IGHV3-43A0A0B4J1X8 118 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 MEIS3P1A6NDR6 274 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 TRDCB7Z8K6 153 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 F2RL2O00254 374 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 FABP7O15540 132 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 SSX5O60225 188 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 HLA-DQB1P01920 261 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 IGHV3-43DP0DP04 118 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 EPHA1P21709 976 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 PRSS3P35030 304 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 KIR2DS4P43632 304 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 UBE2E1P51965 193 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 SCGB2A2Q13296 93 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 KIR2DS1Q14954 304 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 CNPY1Q3B7I2 92 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 TMEM30BQ3MIR4 351 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 RUSC1-AS1Q66K80 236 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 HCP5Q6MZN7 132 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 BRD3OSQ6XYD6 125 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 C5orf24Q7Z6I8 188 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 OR52M1Q8NGK5 317 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 IL1F10Q8WWZ1 152 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 GCDHQ92947 438 aaPredicted RBP8.17□□□□□ -1.1
NUP54-203ENST00000504173 GALMQ96C23 342 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 ST6GALNAC5Q9BVH7 336 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 CLEC7AQ9BXN2 247 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 MS4A7Q9GZW8 240 aaPredicted RBP8.17□□□□□ -1.1
NUP54-203ENST00000504173 ZNF286AQ9HBT8 521 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 IFT46Q9NQC8 304 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 OR2S2Q9NQN1 319 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 GFOD1Q9NXC2 390 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 GNG12Q9UBI6 72 aa8.17□□□□□ -1.1
NUP54-203ENST00000504173 A0A087X0M5 115 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 A0A1B0GX30 115 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 TMEM89A2RUT3 159 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 TOR1AO14656 332 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 NPFFO15130 113 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 TPPPO94811 219 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 IGHV3-7P01780 117 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 ARG1P05089 322 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 LPLP06858 475 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 SCTP09683 121 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 CD34P28906 385 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 TNFSF8P32971 234 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 CBX5P45973 191 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 GNG10P50151 68 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 LGALS4P56470 323 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 LOXL3P58215 753 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 BPIFB3P59826 476 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 HTD2P86397 168 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 IL18Q14116 193 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 SRSF7Q16629 238 aaKnown RBP eCLIP8.16□□□□□ -1.1
NUP54-203ENST00000504173 RNASE12Q5GAN4 147 aaKnown RBP8.16□□□□□ -1.1
NUP54-203ENST00000504173 ABHD12Q8N2K0 398 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 OR11H6Q8NGC7 330 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 OR52L2PQ8NGH6 319 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 OR10V1Q8NGI7 309 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 C15orf40Q8WUR7 153 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 LEAP2Q969E1 77 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 OCSTAMPQ9BR26 566 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 SCPEP1Q9HB40 452 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 RABL2AQ9UBK7 228 aaPredicted RBP8.16□□□□□ -1.1
NUP54-203ENST00000504173 ZNF69Q9UC07 566 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 JPT1Q9UK76 154 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 RABL2BQ9UNT1 228 aa8.16□□□□□ -1.1
NUP54-203ENST00000504173 MEIOCA2RUB1 952 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 FABP12A6NFH5 140 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 ODF3BA8MYP8 253 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 SULT1C2O00338 296 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 HSPA12AO43301 675 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 RGS11O94810 467 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 FCER2P06734 321 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 GSTT2P0CG29 244 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 GSTT2BP0CG30 244 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 SAA4P35542 130 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 PRRX1P54821 245 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 GNMTQ14749 295 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 UTF1Q5T230 341 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 STEAP3Q658P3 488 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 ZNF626Q68DY1 528 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 PYHIN1Q6K0P9 492 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 FAM53AQ6NSI3 398 aaPredicted RBP8.15□□□□□ -1.1
NUP54-203ENST00000504173 FAM131AQ6UXB0 335 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 TREML4Q6UXN2 200 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 Q6ZS49 121 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 GVQW1Q8N7I0 195 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 OR4A4PQ8NGN8 299 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 OR6Q1Q8NGQ2 317 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 OR9G1Q8NH87 305 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 ZNF596Q8TC21 504 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 GPX8Q8TED1 209 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 C22orf15Q8WYQ4 148 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 SLC23A1Q9UHI7 598 aa8.15□□□□□ -1.1
NUP54-203ENST00000504173 IGKV1D-8A0A087WSZ0 117 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 A0A0A6YYJ9 748 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms