RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 OVOL2Q9BRP0 275 aa2.73□□□□□ -1.97
USP46-205ENST00000504078 GON7Q9BXV9 100 aa2.73□□□□□ -1.97
USP46-205ENST00000504078 ANKRD60Q9BZ19 345 aa2.73□□□□□ -1.97
USP46-205ENST00000504078 COMMD4Q9H0A8 199 aa2.73□□□□□ -1.97
USP46-205ENST00000504078 MOB1AQ9H8S9 216 aa2.73□□□□□ -1.97
USP46-205ENST00000504078 SLC25A19Q9HC21 320 aa2.73□□□□□ -1.97
USP46-205ENST00000504078 ZNF355PQ9NSJ1 428 aa2.73□□□□□ -1.97
USP46-205ENST00000504078 ETAA1Q9NY74 926 aa2.73□□□□□ -1.97
USP46-205ENST00000504078 ABCD2Q9UBJ2 740 aa2.73□□□□□ -1.97
USP46-205ENST00000504078 MAGEL2Q9UJ55 1249 aa2.73□□□□□ -1.97
USP46-205ENST00000504078 BAIAP2Q9UQB8 552 aa2.73□□□□□ -1.97
USP46-205ENST00000504078 FOXA2Q9Y261 457 aaPredicted RBP2.73□□□□□ -1.97
USP46-205ENST00000504078 MRPS28Q9Y2Q9 187 aaKnown RBP2.73□□□□□ -1.97
USP46-205ENST00000504078 SNX5Q9Y5X3 404 aa2.73□□□□□ -1.97
USP46-205ENST00000504078 PKHD1P08F94 4074 aa2.73□□□□□ -1.97
USP46-205ENST00000504078 DYNC1H1Q14204 4646 aaKnown RBP2.72□□□□□ -1.97
USP46-205ENST00000504078 A0A1B0GVY2 172 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 FUOMA2VDF0 154 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 ACOD1A6NK06 481 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 OR11H12B2RN74 326 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 ZNF670-ZNF695F2Z2N8 137 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 M0R2N4 97 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 NBR2O15453 112 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 PRKYO43930 277 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 MITFO75030 526 aaPredicted RBP2.72□□□□□ -1.97
USP46-205ENST00000504078 TUSC2O75896 110 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 KDM4BO94953 1096 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 CNIH1O95406 144 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 CA2P00918 260 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 NPPAP01160 153 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 HLA-DRB1P01911 266 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 CSTBP04080 98 aaKnown RBP2.72□□□□□ -1.97
USP46-205ENST00000504078 HSPB1P04792 205 aaKnown RBP2.72□□□□□ -1.97
USP46-205ENST00000504078 CSN2P05814 226 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 CSN3P07498 182 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 HNRNPCP07910 306 aaKnown RBP eCLIP2.72□□□□□ -1.97
USP46-205ENST00000504078 ATF1P18846 271 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 CCL1P22362 96 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 IL3RAP26951 378 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 OR3A3P47888 321 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 RBP2P50120 134 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 FUT6P51993 359 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 ATP1B3P54709 279 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 NANOS2P60321 138 aaKnown RBP2.72□□□□□ -1.97
USP46-205ENST00000504078 CDC42P60953 191 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 PDZK1IP1Q13113 114 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 EBI3Q14213 229 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 TRIM25Q14258 630 aaKnown RBP2.72□□□□□ -1.97
USP46-205ENST00000504078 GINS1Q14691 196 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 CDK5R1Q15078 307 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 CD300EQ496F6 205 aaPredicted RBP2.72□□□□□ -1.97
USP46-205ENST00000504078 TP53I3Q53FA7 332 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 C19orf54Q5BKX5 351 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 LCN1P1Q5VSP4 162 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 FAM131AQ6UXB0 335 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 IL34Q6ZMJ4 242 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 LINC00322Q6ZN03 302 aaPredicted RBP2.72□□□□□ -1.97
USP46-205ENST00000504078 Q8IYB0 196 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 PGAM4Q8N0Y7 254 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 PRSS35Q8N3Z0 413 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 Q8N402 240 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 OR51A4Q8NGJ6 313 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 OR51T1Q8NGJ9 327 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 OR9G4Q8NGQ1 327 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 OR13C3Q8NGS6 347 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 OR1L1Q8NH94 360 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 NEK7Q8TDX7 302 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 PHLDA1Q8WV24 401 aaPredicted RBP2.72□□□□□ -1.97
USP46-205ENST00000504078 STON2Q8WXE9 905 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 ARL11Q969Q4 196 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 FGGYQ96C11 551 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 FLYWCH2Q96CP2 140 aaKnown RBP2.72□□□□□ -1.97
USP46-205ENST00000504078 OPALINQ96PE5 141 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 FEVQ99581 238 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 ZNF251Q9BRH9 671 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 DGCR6LQ9BY27 220 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 YIPF3Q9GZM5 350 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 PARP12Q9H0J9 701 aaKnown RBP2.72□□□□□ -1.97
USP46-205ENST00000504078 CCDC134Q9H6E4 229 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 REEP1Q9H902 201 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 ADGRL4Q9HBW9 690 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 SPAG4Q9NPE6 437 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 TVP23BQ9NYZ1 205 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 GNG12Q9UBI6 72 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 DNAJB9Q9UBS3 223 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 UBQLN2Q9UHD9 624 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 SLC23A1Q9UHI7 598 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 RAB21Q9UL25 225 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 SORL1Q92673 2214 aa2.72□□□□□ -1.97
USP46-205ENST00000504078 C13orf42A0A1B0GVH6 325 aa2.71□□□□□ -1.98
USP46-205ENST00000504078 A0A1W2PP11 408 aa2.71□□□□□ -1.98
USP46-205ENST00000504078 KRTAP23-1A1A580 65 aa2.71□□□□□ -1.98
USP46-205ENST00000504078 FAM90A10PA6NDY2 464 aa2.71□□□□□ -1.98
USP46-205ENST00000504078 NPIPB11E5RHQ5 1161 aa2.71□□□□□ -1.98
USP46-205ENST00000504078 H0Y980 276 aa2.71□□□□□ -1.98
USP46-205ENST00000504078 C15orf65H3BRN8 121 aa2.71□□□□□ -1.98
USP46-205ENST00000504078 AIPO00170 330 aa2.71□□□□□ -1.98
USP46-205ENST00000504078 FCN1O00602 326 aa2.71□□□□□ -1.98
USP46-205ENST00000504078 DEFB4AO15263 64 aa2.71□□□□□ -1.98
USP46-205ENST00000504078 RBMXL2O75526 392 aaKnown RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms