RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 C8orf31Q8N9H6 132 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 C17orf50Q8WW18 174 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 LEAP2Q969E1 77 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 AJUBAQ96IF1 538 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 MEGF9Q9H1U4 602 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 MMP28Q9H239 520 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 DPM3Q9P2X0 92 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 ELF5Q9UKW6 265 aaPredicted RBP9.03□□□□□ -0.96
VCAN-205ENST00000503923 AMMECR1Q9Y4X0 333 aaPredicted RBP9.03□□□□□ -0.96
VCAN-205ENST00000503923 SMIM31A0A1B0GVY4 71 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 DNAJC9-AS1A6NH13 148 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 LEUTXA8MZ59 168 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 TRDCB7Z8K6 153 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 BUB1B-PAK6H3BSN5 160 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 CLDN34H7C241 214 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 HOXA3O43365 443 aaPredicted RBP9.02□□□□□ -0.97
VCAN-205ENST00000503923 YPEL1O60688 119 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 HPGDSO60760 199 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 RGS11O94810 467 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 VENTXO95231 258 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 IGHV3-7P01780 117 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 EIF4EP06730 217 aaKnown RBP9.02□□□□□ -0.97
VCAN-205ENST00000503923 CEACAM3P40198 252 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 MORN2Q502X0 79 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 LY6G6FQ5SQ64 297 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 TMEM69Q5SWH9 247 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 LDLRAD2Q5SZI1 272 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 Q6ZS49 121 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 C5orf24Q7Z6I8 188 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 LINC00311Q8N616 119 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 TMEM86BQ8N661 226 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 ZDHHC22Q8N966 263 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 OR52L2PQ8NGH6 319 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 OR10V1Q8NGI7 309 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 OR10X1Q8NGY0 326 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 NUDCD2Q8WVJ2 157 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 SSMEM1Q8WWF3 244 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 IL1F10Q8WWZ1 152 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 YPEL2Q96QA6 119 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 DPAGT1Q9H3H5 408 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 AUNIPQ9H7T9 357 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 ESM1Q9NQ30 184 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 NDUFA13Q9P0J0 144 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 POMT1Q9Y6A1 747 aa9.02□□□□□ -0.97
VCAN-205ENST00000503923 A0A1W2PPE3 182 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 BTBD17A6NE02 478 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 FAM25AB3EWG3 89 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 FAM25CB3EWG5 89 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 FAM25GB3EWG6 89 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 TRIM77I1YAP6 450 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 FABP7O15540 132 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 SCTP09683 121 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 ELK1P19419 428 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 IER3P46695 156 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 TAS2R20P59543 309 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 SLC9A3R2Q15599 337 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 SSX2Q16385 188 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 AANATQ16613 207 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 LRRC75BQ2VPJ9 315 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 IZUMO1Q8IYV9 350 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 ZNF439Q8NDP4 499 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 OR4A4PQ8NGN8 299 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 ZFAND2BQ8WV99 257 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 MAFIPQ8WZ33 124 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 OCSTAMPQ9BR26 566 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 ZNF230Q9UIE0 474 aaPredicted RBP9.01□□□□□ -0.97
VCAN-205ENST00000503923 ADAM30Q9UKF2 790 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 HILPDAQ9Y5L2 63 aa9.01□□□□□ -0.97
VCAN-205ENST00000503923 VGLL3A8MV65 326 aa9□□□□□ -0.97
VCAN-205ENST00000503923 OOSP1A8MZH6 123 aa9□□□□□ -0.97
VCAN-205ENST00000503923 LY6LH3BQJ8 138 aa9□□□□□ -0.97
VCAN-205ENST00000503923 RGS5O15539 181 aa9□□□□□ -0.97
VCAN-205ENST00000503923 HSPA12AO43301 675 aa9□□□□□ -0.97
VCAN-205ENST00000503923 SSX5O60225 188 aa9□□□□□ -0.97
VCAN-205ENST00000503923 DIRAS3O95661 229 aa9□□□□□ -0.97
VCAN-205ENST00000503923 IGHV4-59P01825 116 aa9□□□□□ -0.97
VCAN-205ENST00000503923 RNASE1P07998 156 aaKnown RBP9□□□□□ -0.97
VCAN-205ENST00000503923 GSTT2P0CG29 244 aa9□□□□□ -0.97
VCAN-205ENST00000503923 GSTT2BP0CG30 244 aa9□□□□□ -0.97
VCAN-205ENST00000503923 ZBTB25P24278 435 aa9□□□□□ -0.97
VCAN-205ENST00000503923 IL3RAP26951 378 aa9□□□□□ -0.97
VCAN-205ENST00000503923 PPP1CCP36873 323 aaKnown RBP9□□□□□ -0.97
VCAN-205ENST00000503923 CBX5P45973 191 aa9□□□□□ -0.97
VCAN-205ENST00000503923 ARHGDIBP52566 201 aa9□□□□□ -0.97
VCAN-205ENST00000503923 UBA52P62987 128 aaKnown RBP9□□□□□ -0.97
VCAN-205ENST00000503923 MADCAM1Q13477 382 aa9□□□□□ -0.97
VCAN-205ENST00000503923 GNMTQ14749 295 aa9□□□□□ -0.97
VCAN-205ENST00000503923 CT45A1Q5HYN5 189 aa9□□□□□ -0.97
VCAN-205ENST00000503923 TPTE2P1Q5T6R2 138 aa9□□□□□ -0.97
VCAN-205ENST00000503923 FAM53AQ6NSI3 398 aaPredicted RBP9□□□□□ -0.97
VCAN-205ENST00000503923 CCDC144NLQ6NUI1 221 aa9□□□□□ -0.97
VCAN-205ENST00000503923 SLC25A48Q6ZT89 311 aaKnown RBP9□□□□□ -0.97
VCAN-205ENST00000503923 DYNAPQ8N1N2 210 aa9□□□□□ -0.97
VCAN-205ENST00000503923 DTX3Q8N9I9 347 aa9□□□□□ -0.97
VCAN-205ENST00000503923 OR5R1Q8NH85 324 aa9□□□□□ -0.97
VCAN-205ENST00000503923 CT45A3Q8NHU0 189 aa9□□□□□ -0.97
VCAN-205ENST00000503923 RPEQ96AT9 228 aa9□□□□□ -0.97
VCAN-205ENST00000503923 DUX5Q96PT3 197 aa9□□□□□ -0.97
VCAN-205ENST00000503923 SSX3Q99909 188 aa9□□□□□ -0.97
VCAN-205ENST00000503923 ABHD14AQ9BUJ0 271 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms