RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 DBX1A6NMT0 343 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 F5H0A9 414 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 J3QKU1 62 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 F2RL2O00254 374 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 CREBL2O60519 120 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 SFT2D2O95562 160 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 HLA-AP01891 365 aaKnown RBP5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 IGHV3-43DP0DP04 118 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 PGAM2P15259 253 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 OMGP23515 440 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 PPP1CCP36873 323 aaKnown RBP5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 ECI1P42126 302 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 EFNA4P52798 201 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 DLX6P56179 175 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 PIGPP57054 158 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 ERVFRD-1P60508 538 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 HERV-K104P61576 105 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 HTD2P86397 168 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 CD83Q01151 205 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 EIF4EBP1Q13541 118 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 SLC9A3R2Q15599 337 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 C4orf46Q504U0 113 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 PHLDA2Q53GA4 152 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 LY6G6FQ5SQ64 297 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 DCAF12L2Q5VW00 463 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 SP5Q6BEB4 398 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 LIN54Q6MZP7 749 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 FAHD2BQ6P2I3 314 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 OR5D13Q8NGL4 314 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 OR10J5Q8NHC4 309 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 MITD1Q8WV92 249 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 SECTM1Q8WVN6 248 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 CORO2AQ92828 525 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 ARL11Q969Q4 196 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 GALMQ96C23 342 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 FAHD2AQ96GK7 314 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 CHODLQ9H9P2 273 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 RANGRFQ9HD47 186 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 CCL28Q9NRJ3 127 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 SLC2A9Q9NRM0 540 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 CALYQ9NYX4 217 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 KCNIP1Q9NZI2 227 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 PIPOXQ9P0Z9 390 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 OPN4Q9UHM6 478 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 OR2W1Q9Y3N9 320 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 NBPF19A0A087WUL8 3843 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 CRYBG3Q68DQ2 2970 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 KBTBD11-OT1A0A1B0GTJ5 212 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 FAM172BPA6NC97 362 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 SMLR1H3BR10 107 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 HSD17B6O14756 317 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 SLC31A2O15432 143 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 PPIHO43447 177 aaKnown RBP5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 NDUFB3O43676 98 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 NDUFA2O43678 99 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 SSNA1O43805 119 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 CCNKO75909 580 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 SIX6O95475 246 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 DUS4LO95620 317 aaKnown RBP5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 WNT2P09544 360 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 COX6B1P14854 86 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 CCL3L1P16619 93 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 NDUFB7P17568 137 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 GZMHP20718 246 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 VAMP1P23763 118 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 IL2RGP31785 369 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 CEACAM6P40199 344 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 ZNF134P52741 427 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 H2BFSP57053 126 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 TAS2R31P59538 309 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 KRTAP10-9P60411 292 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 RND3P61587 244 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 RPL31P62899 125 aaKnown RBP5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 MEF2CQ06413 473 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 LTC4SQ16873 150 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 TMEM155Q4W5P6 130 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 TMEM128Q5BJH2 165 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 PRAMEF5Q5TYX0 476 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 TMEM200BQ69YZ2 307 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 TRAT1Q6PIZ9 186 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 SLC38A6Q8IZM9 456 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 TCTE3Q8IZS6 198 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 C12orf45Q8N5I9 185 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 SPICQ8N5J4 248 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 C11orf42Q8N5U0 333 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 ZNF525Q8N782 197 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 ZNF439Q8NDP4 499 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 OR2AK2Q8NG84 335 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 OR10V1Q8NGI7 309 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 LHFPL5Q8TAF8 219 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 CASTOR1Q8WTX7 329 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 DACT3Q96B18 629 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 DMRTB1Q96MA1 342 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 TP53RKQ96S44 253 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 AGMATQ9BSE5 352 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 SLC5A7Q9GZV3 580 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 MED28Q9H204 178 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 NAA60Q9H7X0 242 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 GPN1Q9HCN4 374 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 OR6C3Q9NZP0 311 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms