RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 SPCS2Q15005 226 aa20.29■□□□□ 0.84
LSM6-202ENST00000502781 HACD4Q5VWC8 232 aa20.29■□□□□ 0.84
LSM6-202ENST00000502781 PIFOQ8TCI5 191 aa20.29■□□□□ 0.84
LSM6-202ENST00000502781 CHIAQ9BZP6 476 aa20.29■□□□□ 0.84
LSM6-202ENST00000502781 OR2S2Q9NQN1 319 aa20.29■□□□□ 0.84
LSM6-202ENST00000502781 GNG12Q9UBI6 72 aa20.29■□□□□ 0.84
LSM6-202ENST00000502781 LEUTXA8MZ59 168 aa20.28■□□□□ 0.84
LSM6-202ENST00000502781 FCGR3AP08637 254 aa20.28■□□□□ 0.84
LSM6-202ENST00000502781 HLA-DRB3P79483 266 aa20.28■□□□□ 0.84
LSM6-202ENST00000502781 LRRC75BQ2VPJ9 315 aa20.28■□□□□ 0.84
LSM6-202ENST00000502781 UBE2NLQ5JXB2 153 aa20.28■□□□□ 0.84
LSM6-202ENST00000502781 LY6G6FQ5SQ64 297 aa20.28■□□□□ 0.84
LSM6-202ENST00000502781 C16orf87Q6PH81 154 aa20.28■□□□□ 0.84
LSM6-202ENST00000502781 SAMD12Q8N8I0 201 aa20.28■□□□□ 0.84
LSM6-202ENST00000502781 OR5R1Q8NH85 324 aa20.28■□□□□ 0.84
LSM6-202ENST00000502781 SETD6Q8TBK2 473 aa20.28■□□□□ 0.84
LSM6-202ENST00000502781 ACOT12Q8WYK0 555 aa20.28■□□□□ 0.84
LSM6-202ENST00000502781 MDFIQ99750 246 aa20.28■□□□□ 0.84
LSM6-202ENST00000502781 SSX3Q99909 188 aa20.28■□□□□ 0.84
LSM6-202ENST00000502781 ZNF182P17025 639 aaPredicted RBP20.27■□□□□ 0.84
LSM6-202ENST00000502781 GNG10P50151 68 aa20.27■□□□□ 0.84
LSM6-202ENST00000502781 DYNLT3P51808 116 aa20.27■□□□□ 0.84
LSM6-202ENST00000502781 MRPS15P82914 257 aaKnown RBP20.27■□□□□ 0.84
LSM6-202ENST00000502781 SRSF7Q16629 238 aaKnown RBP eCLIP20.27■□□□□ 0.84
LSM6-202ENST00000502781 MORN2Q502X0 79 aa20.27■□□□□ 0.84
LSM6-202ENST00000502781 STEAP3Q658P3 488 aa20.27■□□□□ 0.84
LSM6-202ENST00000502781 SLC25A48Q6ZT89 311 aaKnown RBP20.27■□□□□ 0.84
LSM6-202ENST00000502781 PHF21AQ96BD5 680 aa20.27■□□□□ 0.84
LSM6-202ENST00000502781 CMTM3Q96MX0 182 aa20.27■□□□□ 0.84
LSM6-202ENST00000502781 OCSTAMPQ9BR26 566 aa20.27■□□□□ 0.84
LSM6-202ENST00000502781 DIABLOQ9NR28 239 aa20.27■□□□□ 0.84
LSM6-202ENST00000502781 AMMECR1Q9Y4X0 333 aaPredicted RBP20.27■□□□□ 0.84
LSM6-202ENST00000502781 HILPDAQ9Y5L2 63 aa20.27■□□□□ 0.84
LSM6-202ENST00000502781 CEPT1Q9Y6K0 416 aa20.27■□□□□ 0.84
LSM6-202ENST00000502781 A0A1W2PPE3 182 aa20.26■□□□□ 0.83
LSM6-202ENST00000502781 TMEM235A6NFC5 223 aa20.26■□□□□ 0.83
LSM6-202ENST00000502781 YPEL1O60688 119 aa20.26■□□□□ 0.83
LSM6-202ENST00000502781 CEACAM3P40198 252 aa20.26■□□□□ 0.83
LSM6-202ENST00000502781 ZNF134P52741 427 aa20.26■□□□□ 0.83
LSM6-202ENST00000502781 GNMTQ14749 295 aa20.26■□□□□ 0.83
LSM6-202ENST00000502781 PNLIPRP3Q17RR3 467 aa20.26■□□□□ 0.83
LSM6-202ENST00000502781 TPTE2P1Q5T6R2 138 aa20.26■□□□□ 0.83
LSM6-202ENST00000502781 Q6ZS49 121 aa20.26■□□□□ 0.83
LSM6-202ENST00000502781 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.26■□□□□ 0.83
LSM6-202ENST00000502781 OR52L2PQ8NGH6 319 aa20.26■□□□□ 0.83
LSM6-202ENST00000502781 OR10V1Q8NGI7 309 aa20.26■□□□□ 0.83
LSM6-202ENST00000502781 ISOC1Q96CN7 298 aa20.26■□□□□ 0.83
LSM6-202ENST00000502781 YPEL2Q96QA6 119 aa20.26■□□□□ 0.83
LSM6-202ENST00000502781 VPREB3Q9UKI3 123 aa20.26■□□□□ 0.83
LSM6-202ENST00000502781 OOSP1A8MZH6 123 aa20.25■□□□□ 0.83
LSM6-202ENST00000502781 TRDCB7Z8K6 153 aa20.25■□□□□ 0.83
LSM6-202ENST00000502781 H3BUX3 64 aa20.25■□□□□ 0.83
LSM6-202ENST00000502781 DTYMKP23919 212 aa20.25■□□□□ 0.83
LSM6-202ENST00000502781 ARFRP1Q13795 201 aa20.25■□□□□ 0.83
LSM6-202ENST00000502781 CT45A1Q5HYN5 189 aa20.25■□□□□ 0.83
LSM6-202ENST00000502781 CT45A3Q8NHU0 189 aa20.25■□□□□ 0.83
LSM6-202ENST00000502781 S100A16Q96FQ6 103 aaKnown RBP20.25■□□□□ 0.83
LSM6-202ENST00000502781 COMMD3Q9UBI1 195 aa20.25■□□□□ 0.83
LSM6-202ENST00000502781 TRAV18A0A075B6X5 111 aa20.24■□□□□ 0.83
LSM6-202ENST00000502781 RNF212BA8MTL3 300 aa20.24■□□□□ 0.83
LSM6-202ENST00000502781 H3BMQ9 156 aa20.24■□□□□ 0.83
LSM6-202ENST00000502781 SLC31A2O15432 143 aa20.24■□□□□ 0.83
LSM6-202ENST00000502781 XRCC3O43542 346 aa20.24■□□□□ 0.83
LSM6-202ENST00000502781 SCTP09683 121 aa20.24■□□□□ 0.83
LSM6-202ENST00000502781 PPP1CCP36873 323 aaKnown RBP20.24■□□□□ 0.83
LSM6-202ENST00000502781 PITPNAQ00169 270 aa20.24■□□□□ 0.83
LSM6-202ENST00000502781 MADCAM1Q13477 382 aa20.24■□□□□ 0.83
LSM6-202ENST00000502781 AP3S1Q92572 193 aa20.24■□□□□ 0.83
LSM6-202ENST00000502781 C19orf24Q9BVV8 132 aa20.24■□□□□ 0.83
LSM6-202ENST00000502781 TNFRSF19Q9NS68 423 aa20.24■□□□□ 0.83
LSM6-202ENST00000502781 ZNF230Q9UIE0 474 aaPredicted RBP20.24■□□□□ 0.83
LSM6-202ENST00000502781 IGKV1-6A0A0C4DH72 117 aa20.23■□□□□ 0.83
LSM6-202ENST00000502781 BTBD17A6NE02 478 aa20.23■□□□□ 0.83
LSM6-202ENST00000502781 APOA1P02647 267 aa20.23■□□□□ 0.83
LSM6-202ENST00000502781 KIR2DS4P43632 304 aa20.23■□□□□ 0.83
LSM6-202ENST00000502781 KIR2DS1Q14954 304 aa20.23■□□□□ 0.83
LSM6-202ENST00000502781 HERPUD1Q15011 391 aa20.23■□□□□ 0.83
LSM6-202ENST00000502781 OR10X1Q8NGY0 326 aa20.23■□□□□ 0.83
LSM6-202ENST00000502781 DYNC2LI1Q8TCX1 351 aa20.23■□□□□ 0.83
LSM6-202ENST00000502781 NUDCD2Q8WVJ2 157 aa20.23■□□□□ 0.83
LSM6-202ENST00000502781 IL1F10Q8WWZ1 152 aa20.23■□□□□ 0.83
LSM6-202ENST00000502781 ST6GALNAC6Q969X2 333 aa20.23■□□□□ 0.83
LSM6-202ENST00000502781 RBM38Q9H0Z9 239 aaKnown RBP20.23■□□□□ 0.83
LSM6-202ENST00000502781 AUNIPQ9H7T9 357 aa20.23■□□□□ 0.83
LSM6-202ENST00000502781 FABP7O15540 132 aa20.22■□□□□ 0.83
LSM6-202ENST00000502781 SSX5O60225 188 aa20.22■□□□□ 0.83
LSM6-202ENST00000502781 RGS11O94810 467 aa20.22■□□□□ 0.83
LSM6-202ENST00000502781 DIRAS3O95661 229 aa20.22■□□□□ 0.83
LSM6-202ENST00000502781 EIF4EP06730 217 aaKnown RBP20.22■□□□□ 0.83
LSM6-202ENST00000502781 TALDO1P37837 337 aa20.22■□□□□ 0.83
LSM6-202ENST00000502781 ZNF137PP52743 207 aa20.22■□□□□ 0.83
LSM6-202ENST00000502781 RPL15P61313 204 aaKnown RBP20.22■□□□□ 0.83
LSM6-202ENST00000502781 OR4A4PQ8NGN8 299 aa20.22■□□□□ 0.83
LSM6-202ENST00000502781 CABLES2Q9BTV7 478 aa20.22■□□□□ 0.83
LSM6-202ENST00000502781 FAM181BA6NEQ2 426 aa20.21■□□□□ 0.83
LSM6-202ENST00000502781 GPR137BO60478 399 aa20.21■□□□□ 0.83
LSM6-202ENST00000502781 RAB13P51153 203 aa20.21■□□□□ 0.83
LSM6-202ENST00000502781 GNG2P59768 71 aa20.21■□□□□ 0.83
LSM6-202ENST00000502781 DIAPH2-AS1Q14236 149 aa20.21■□□□□ 0.83
LSM6-202ENST00000502781 PLA1AQ53H76 456 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms