RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 TOLLIPQ9H0E2 274 aa11.3□□□□□ -0.6
SEC61A1-207ENST00000498837 IL36GQ9NZH8 169 aa11.3□□□□□ -0.6
SEC61A1-207ENST00000498837 GNG12Q9UBI6 72 aa11.3□□□□□ -0.6
SEC61A1-207ENST00000498837 LDLRAD4O15165 306 aa11.29□□□□□ -0.6
SEC61A1-207ENST00000498837 LANCL1O43813 399 aa11.29□□□□□ -0.6
SEC61A1-207ENST00000498837 SOX15O60248 233 aa11.29□□□□□ -0.6
SEC61A1-207ENST00000498837 HBZP02008 142 aa11.29□□□□□ -0.6
SEC61A1-207ENST00000498837 RPSAP08865 295 aaKnown RBP11.29□□□□□ -0.6
SEC61A1-207ENST00000498837 IGHV4-30-4P0DP06 118 aa11.29□□□□□ -0.6
SEC61A1-207ENST00000498837 GTF2A1P52655 376 aaPredicted RBP11.29□□□□□ -0.6
SEC61A1-207ENST00000498837 MPV17LQ2QL34 196 aa11.29□□□□□ -0.6
SEC61A1-207ENST00000498837 MEDAGQ5VYS4 303 aa11.29□□□□□ -0.6
SEC61A1-207ENST00000498837 C5orf24Q7Z6I8 188 aa11.29□□□□□ -0.6
SEC61A1-207ENST00000498837 LINC00596Q86U02 117 aa11.29□□□□□ -0.6
SEC61A1-207ENST00000498837 HAPLN4Q86UW8 402 aa11.29□□□□□ -0.6
SEC61A1-207ENST00000498837 MRPL48Q96GC5 212 aaKnown RBP11.29□□□□□ -0.6
SEC61A1-207ENST00000498837 GHITMQ9H3K2 345 aa11.29□□□□□ -0.6
SEC61A1-207ENST00000498837 TRAPPC2LQ9UL33 140 aa11.29□□□□□ -0.6
SEC61A1-207ENST00000498837 FBXO7Q9Y3I1 522 aa11.29□□□□□ -0.6
SEC61A1-207ENST00000498837 PLECQ15149 4684 aaKnown RBP11.29□□□□□ -0.6
SEC61A1-207ENST00000498837 A0A1W2PN81 502 aa11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 SPINT2O43291 252 aa11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 ZNF93P35789 620 aaPredicted RBP11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 CHRNA7P36544 502 aa11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 ADARB1P78563 741 aaKnown RBP11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 NDPQ00604 133 aa11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 ECSCRQ19T08 205 aa11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 C5orf64Q2M2E5 130 aa11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 ZIK1Q3SY52 487 aaPredicted RBP11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 C19orf54Q5BKX5 351 aa11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 STX19Q8N4C7 294 aa11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 ORAI1Q96D31 301 aa11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 CENPNQ96H22 339 aaPredicted RBP11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 CYYR1Q96J86 154 aa11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 S100A13Q99584 98 aa11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 ZNF251Q9BRH9 671 aa11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 MRPL20Q9BYC9 149 aaKnown RBP11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 C19orf73Q9NVV2 129 aa11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 CHCHD3Q9NX63 227 aaKnown RBP11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 ERVK13-1Q9NX77 482 aa11.28□□□□□ -0.6
SEC61A1-207ENST00000498837 NBR2O15453 112 aa11.27□□□□□ -0.61
SEC61A1-207ENST00000498837 LGALS1P09382 135 aaKnown RBP11.27□□□□□ -0.61
SEC61A1-207ENST00000498837 OR8U9P0C7N5 309 aa11.27□□□□□ -0.61
SEC61A1-207ENST00000498837 FCGR1AP12314 374 aa11.27□□□□□ -0.61
SEC61A1-207ENST00000498837 RCC1P18754 421 aaPredicted RBP11.27□□□□□ -0.61
SEC61A1-207ENST00000498837 VEGFCP49767 419 aa11.27□□□□□ -0.61
SEC61A1-207ENST00000498837 GBX2P52951 348 aaPredicted RBP11.27□□□□□ -0.61
SEC61A1-207ENST00000498837 PITPNAQ00169 270 aa11.27□□□□□ -0.61
SEC61A1-207ENST00000498837 GNMTQ14749 295 aa11.27□□□□□ -0.61
SEC61A1-207ENST00000498837 SLC22A6Q4U2R8 563 aa11.27□□□□□ -0.61
SEC61A1-207ENST00000498837 MORN2Q502X0 79 aa11.27□□□□□ -0.61
SEC61A1-207ENST00000498837 DDI2Q5TDH0 399 aa11.27□□□□□ -0.61
SEC61A1-207ENST00000498837 LIN54Q6MZP7 749 aa11.27□□□□□ -0.61
SEC61A1-207ENST00000498837 ODF3L1Q8IXM7 274 aa11.27□□□□□ -0.61
SEC61A1-207ENST00000498837 OR4C12Q96R67 309 aa11.27□□□□□ -0.61
SEC61A1-207ENST00000498837 NABP2Q9BQ15 211 aa11.27□□□□□ -0.61
SEC61A1-207ENST00000498837 AMBNQ9NP70 447 aa11.27□□□□□ -0.61
SEC61A1-207ENST00000498837 MCRIP1C9JLW8 97 aa11.26□□□□□ -0.61
SEC61A1-207ENST00000498837 IGHV3-11P01762 117 aa11.26□□□□□ -0.61
SEC61A1-207ENST00000498837 GABRB1P18505 474 aa11.26□□□□□ -0.61
SEC61A1-207ENST00000498837 MRPL28Q13084 256 aaKnown RBP11.26□□□□□ -0.61
SEC61A1-207ENST00000498837 C6orf183Q5T699 404 aa11.26□□□□□ -0.61
SEC61A1-207ENST00000498837 STEAP3Q658P3 488 aa11.26□□□□□ -0.61
SEC61A1-207ENST00000498837 XAF1Q6GPH4 301 aa11.26□□□□□ -0.61
SEC61A1-207ENST00000498837 NPBQ8NG41 125 aa11.26□□□□□ -0.61
SEC61A1-207ENST00000498837 OR52L2PQ8NGH6 319 aa11.26□□□□□ -0.61
SEC61A1-207ENST00000498837 TMEM106AQ96A25 262 aa11.26□□□□□ -0.61
SEC61A1-207ENST00000498837 MYCBPQ99417 103 aaPredicted RBP11.26□□□□□ -0.61
SEC61A1-207ENST00000498837 TMEM138Q9NPI0 162 aa11.26□□□□□ -0.61
SEC61A1-207ENST00000498837 OR2S2Q9NQN1 319 aa11.26□□□□□ -0.61
SEC61A1-207ENST00000498837 PAK1IP1Q9NWT1 392 aaPredicted RBP11.26□□□□□ -0.61
SEC61A1-207ENST00000498837 ETAA1Q9NY74 926 aa11.26□□□□□ -0.61
SEC61A1-207ENST00000498837 RCC2Q9P258 522 aaKnown RBP11.26□□□□□ -0.61
SEC61A1-207ENST00000498837 MRPS28Q9Y2Q9 187 aaKnown RBP11.26□□□□□ -0.61
SEC61A1-207ENST00000498837 A3GALT2U3KPV4 340 aa11.26□□□□□ -0.61
SEC61A1-207ENST00000498837 SNTNA6NMZ2 147 aa11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 A8MZ25 164 aa11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 NDUFA3O95167 84 aa11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 FADS2O95864 444 aaKnown RBP11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 ALPLP05186 524 aa11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 CD2P06729 351 aa11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 GTF2F2P13984 249 aa11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 BDKRB2P30411 391 aa11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 PPP1CCP36873 323 aaKnown RBP11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 OR3A3P47888 321 aa11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 LRRC36Q1X8D7 754 aa11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 TMEM30BQ3MIR4 351 aa11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 GAPTQ8N292 157 aa11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 GPR148Q8TDV2 347 aa11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 ZNF184Q99676 751 aaPredicted RBP11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 ABHD14AQ9BUJ0 271 aa11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 TAF9BQ9HBM6 251 aa11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 RAB9BQ9NP90 201 aa11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 FOXA2Q9Y261 457 aaPredicted RBP11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 NUBP2Q9Y5Y2 271 aa11.25□□□□□ -0.61
SEC61A1-207ENST00000498837 FCN1O00602 326 aa11.24□□□□□ -0.61
SEC61A1-207ENST00000498837 ZNF780AO75290 641 aaPredicted RBP11.24□□□□□ -0.61
SEC61A1-207ENST00000498837 IGLV1-51P01701 117 aa11.24□□□□□ -0.61
SEC61A1-207ENST00000498837 HSPB1P04792 205 aaKnown RBP11.24□□□□□ -0.61
SEC61A1-207ENST00000498837 EGR2P11161 476 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms