RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 CEPT1Q9Y6K0 416 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 PLECQ15149 4684 aaKnown RBP6.96□□□□□ -1.29
CCDC171-209ENST00000498725 DAPL1A0PJW8 107 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 IZUMO1RA6ND01 250 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 GEMIN2O14893 280 aaKnown RBP6.96□□□□□ -1.3
CCDC171-209ENST00000498725 SPINT2O43291 252 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 FKBP6O75344 327 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 DCTN3O75935 186 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 ISG15P05161 165 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 SERPINA2P20848 420 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 KCNJ3P48549 501 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 GNMTQ14749 295 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 UNQ5815/PRO19632Q6UWF5 114 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 SERPINA12Q8IW75 414 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 ARHGAP24Q8N264 748 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 C8orf31Q8N9H6 132 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 OR51A2Q8NGJ7 313 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 OR5D14Q8NGL3 314 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 OR4K15Q8NH41 348 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 DNAJC9Q8WXX5 260 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 NSL1Q96IY1 281 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 ST6GALNAC5Q9BVH7 336 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 CST11Q9H112 138 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 ZNF446Q9NWS9 450 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 ADAM30Q9UKF2 790 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 TRAPPC2LQ9UL33 140 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 GAB2Q9UQC2 676 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 ARL2BPQ9Y2Y0 163 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 FRAS1Q86XX4 4008 aa6.96□□□□□ -1.3
CCDC171-209ENST00000498725 CXorf65A6NEN9 183 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 OR4C45A6NMZ5 311 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 H0Y980 276 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 FCN1O00602 326 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 MAGEB3O15480 346 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 LANCL1O43813 399 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 ORC5O43913 435 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 RGS11O94810 467 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 HBZP02008 142 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 MT-ND4P03905 459 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 TRGV3P03979 118 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 OR3A3P47888 321 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 SOX2P48431 317 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 RBM11P57052 281 aaKnown RBP6.95□□□□□ -1.3
CCDC171-209ENST00000498725 SYNJ2BPP57105 145 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 CX3CL1P78423 397 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 ADARB1P78563 741 aaKnown RBP6.95□□□□□ -1.3
CCDC171-209ENST00000498725 DEFA5Q01523 94 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 ALKBH1Q13686 389 aaKnown RBP6.95□□□□□ -1.3
CCDC171-209ENST00000498725 ACTBL2Q562R1 376 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 C19orf54Q5BKX5 351 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 SYT6Q5T7P8 510 aaPredicted RBP6.95□□□□□ -1.3
CCDC171-209ENST00000498725 PPP1R27Q86WC6 154 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 STX19Q8N4C7 294 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 RPP25LQ8N5L8 163 aaKnown RBP6.95□□□□□ -1.3
CCDC171-209ENST00000498725 PXT1Q8NFP0 134 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 OR52N1Q8NH53 320 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 C4orf36Q96KX1 117 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 NABP2Q9BQ15 211 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 THTPAQ9BU02 230 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 WFDC10AQ9H1F0 79 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 CNOT2Q9NZN8 540 aaKnown RBP6.95□□□□□ -1.3
CCDC171-209ENST00000498725 DHDHQ9UQ10 334 aa6.95□□□□□ -1.3
CCDC171-209ENST00000498725 C13orf42A0A1B0GVH6 325 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 A0A1W2PP11 408 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 SHISA3A0PJX4 238 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 AQP12BA6NM10 295 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 EGR2P11161 476 aaPredicted RBP6.94□□□□□ -1.3
CCDC171-209ENST00000498725 RCC1P18754 421 aaPredicted RBP6.94□□□□□ -1.3
CCDC171-209ENST00000498725 RAB3AP20336 220 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 PPP1CCP36873 323 aaKnown RBP6.94□□□□□ -1.3
CCDC171-209ENST00000498725 POLR2IP36954 125 aaKnown RBP6.94□□□□□ -1.3
CCDC171-209ENST00000498725 ZNF137PP52743 207 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 CD81P60033 236 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 PAX5Q02548 391 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 TMEM267Q0VDI3 215 aaPredicted RBP6.94□□□□□ -1.3
CCDC171-209ENST00000498725 RAB40BQ12829 278 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 LCN12Q6JVE5 192 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 FDX2Q6P4F2 183 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 FAM131AQ6UXB0 335 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 ZNF497Q6ZNH5 498 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 AQP12AQ8IXF9 295 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 DEFB125Q8N687 156 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 LFNGQ8NES3 379 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 OR52L2PQ8NGH6 319 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 MRPS24Q96EL2 167 aaKnown RBP6.94□□□□□ -1.3
CCDC171-209ENST00000498725 PELI1Q96FA3 418 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 CYYR1Q96J86 154 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 RHOVQ96L33 236 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 RDH12Q96NR8 316 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 S100A13Q99584 98 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 METTL9Q9H1A3 318 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 RIBC2Q9H4K1 309 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 OR2S2Q9NQN1 319 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 ETAA1Q9NY74 926 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 TAS2R4Q9NYW5 299 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 NUBP2Q9Y5Y2 271 aa6.94□□□□□ -1.3
CCDC171-209ENST00000498725 G3V2T6 193 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 SLC16A6O15403 523 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 DEDDO75618 318 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 TPPPO94811 219 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms