RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 STX19Q8N4C7 294 aa10.71□□□□□ -0.69
CCDC58-207ENST00000498466 OR51A2Q8NGJ7 313 aa10.71□□□□□ -0.69
CCDC58-207ENST00000498466 ALMS1Q8TCU4 4167 aa10.71□□□□□ -0.69
CCDC58-207ENST00000498466 RITA1Q96K30 269 aa10.71□□□□□ -0.69
CCDC58-207ENST00000498466 GABARAPL1Q9H0R8 117 aa10.71□□□□□ -0.69
CCDC58-207ENST00000498466 CST11Q9H112 138 aa10.71□□□□□ -0.69
CCDC58-207ENST00000498466 METTL9Q9H1A3 318 aa10.71□□□□□ -0.69
CCDC58-207ENST00000498466 RAB9BQ9NP90 201 aa10.71□□□□□ -0.69
CCDC58-207ENST00000498466 TRAPPC2LQ9UL33 140 aa10.71□□□□□ -0.69
CCDC58-207ENST00000498466 STUB1Q9UNE7 303 aa10.71□□□□□ -0.69
CCDC58-207ENST00000498466 POMPQ9Y244 141 aa10.71□□□□□ -0.69
CCDC58-207ENST00000498466 FOXA2Q9Y261 457 aaPredicted RBP10.71□□□□□ -0.69
CCDC58-207ENST00000498466 A3GALT2U3KPV4 340 aa10.71□□□□□ -0.69
CCDC58-207ENST00000498466 TMEM212A6NML5 194 aa10.7□□□□□ -0.7
CCDC58-207ENST00000498466 SOX15O60248 233 aa10.7□□□□□ -0.7
CCDC58-207ENST00000498466 IGLV1-51P01701 117 aa10.7□□□□□ -0.7
CCDC58-207ENST00000498466 RPSAP08865 295 aaKnown RBP10.7□□□□□ -0.7
CCDC58-207ENST00000498466 SERPINA2P20848 420 aa10.7□□□□□ -0.7
CCDC58-207ENST00000498466 ATP6AP1Q15904 470 aa10.7□□□□□ -0.7
CCDC58-207ENST00000498466 C5orf64Q2M2E5 130 aa10.7□□□□□ -0.7
CCDC58-207ENST00000498466 MPV17LQ2QL34 196 aa10.7□□□□□ -0.7
CCDC58-207ENST00000498466 TMEM30BQ3MIR4 351 aa10.7□□□□□ -0.7
CCDC58-207ENST00000498466 NHLRC3Q5JS37 347 aa10.7□□□□□ -0.7
CCDC58-207ENST00000498466 SYT6Q5T7P8 510 aaPredicted RBP10.7□□□□□ -0.7
CCDC58-207ENST00000498466 ASCL4Q6XD76 172 aa10.7□□□□□ -0.7
CCDC58-207ENST00000498466 LINC00596Q86U02 117 aa10.7□□□□□ -0.7
CCDC58-207ENST00000498466 ACBD7Q8N6N7 88 aa10.7□□□□□ -0.7
CCDC58-207ENST00000498466 OR5AK2Q8NH90 309 aa10.7□□□□□ -0.7
CCDC58-207ENST00000498466 IL17DQ8TAD2 202 aa10.7□□□□□ -0.7
CCDC58-207ENST00000498466 MRPL48Q96GC5 212 aaKnown RBP10.7□□□□□ -0.7
CCDC58-207ENST00000498466 S100A13Q99584 98 aa10.7□□□□□ -0.7
CCDC58-207ENST00000498466 PDCD1LG2Q9BQ51 273 aa10.7□□□□□ -0.7
CCDC58-207ENST00000498466 KIAA1456Q9P272 454 aa10.7□□□□□ -0.7
CCDC58-207ENST00000498466 GYG2O15488 501 aa10.69□□□□□ -0.7
CCDC58-207ENST00000498466 HBZP02008 142 aa10.69□□□□□ -0.7
CCDC58-207ENST00000498466 SOX2P48431 317 aa10.69□□□□□ -0.7
CCDC58-207ENST00000498466 NDPQ00604 133 aa10.69□□□□□ -0.7
CCDC58-207ENST00000498466 C6orf183Q5T699 404 aa10.69□□□□□ -0.7
CCDC58-207ENST00000498466 STEAP3Q658P3 488 aa10.69□□□□□ -0.7
CCDC58-207ENST00000498466 ZNF529Q6P280 563 aa10.69□□□□□ -0.7
CCDC58-207ENST00000498466 TCTEX1D1Q8N7M0 179 aa10.69□□□□□ -0.7
CCDC58-207ENST00000498466 OR4K15Q8NH41 348 aa10.69□□□□□ -0.7
CCDC58-207ENST00000498466 OR1L1Q8NH94 360 aa10.69□□□□□ -0.7
CCDC58-207ENST00000498466 ABHD5Q8WTS1 349 aa10.69□□□□□ -0.7
CCDC58-207ENST00000498466 ALG8Q9BVK2 526 aa10.69□□□□□ -0.7
CCDC58-207ENST00000498466 GABARAPL3Q9BY60 117 aa10.69□□□□□ -0.7
CCDC58-207ENST00000498466 MRPL20Q9BYC9 149 aaKnown RBP10.69□□□□□ -0.7
CCDC58-207ENST00000498466 TUBA4BQ9H853 241 aa10.69□□□□□ -0.7
CCDC58-207ENST00000498466 IMPAD1Q9NX62 359 aa10.69□□□□□ -0.7
CCDC58-207ENST00000498466 TAS2R4Q9NYW5 299 aa10.69□□□□□ -0.7
CCDC58-207ENST00000498466 IL36GQ9NZH8 169 aa10.69□□□□□ -0.7
CCDC58-207ENST00000498466 FBXO7Q9Y3I1 522 aa10.69□□□□□ -0.7
CCDC58-207ENST00000498466 ARPC1BO15143 372 aaKnown RBP10.68□□□□□ -0.7
CCDC58-207ENST00000498466 LRRC36Q1X8D7 754 aa10.68□□□□□ -0.7
CCDC58-207ENST00000498466 DNAL1Q4LDG9 190 aa10.68□□□□□ -0.7
CCDC58-207ENST00000498466 C19orf54Q5BKX5 351 aa10.68□□□□□ -0.7
CCDC58-207ENST00000498466 PYHIN1Q6K0P9 492 aa10.68□□□□□ -0.7
CCDC58-207ENST00000498466 LHFPL3Q86UP9 236 aa10.68□□□□□ -0.7
CCDC58-207ENST00000498466 NPBQ8NG41 125 aa10.68□□□□□ -0.7
CCDC58-207ENST00000498466 TRUB1Q8WWH5 349 aaKnown RBP10.68□□□□□ -0.7
CCDC58-207ENST00000498466 MS4A10Q96PG2 267 aa10.68□□□□□ -0.7
CCDC58-207ENST00000498466 MYCBPQ99417 103 aaPredicted RBP10.68□□□□□ -0.7
CCDC58-207ENST00000498466 NABP2Q9BQ15 211 aa10.68□□□□□ -0.7
CCDC58-207ENST00000498466 ABHD14AQ9BUJ0 271 aa10.68□□□□□ -0.7
CCDC58-207ENST00000498466 TMED9Q9BVK6 235 aa10.68□□□□□ -0.7
CCDC58-207ENST00000498466 ISG20L2Q9H9L3 353 aaKnown RBP10.68□□□□□ -0.7
CCDC58-207ENST00000498466 OR2S2Q9NQN1 319 aa10.68□□□□□ -0.7
CCDC58-207ENST00000498466 PAK1IP1Q9NWT1 392 aaPredicted RBP10.68□□□□□ -0.7
CCDC58-207ENST00000498466 FRAS1Q86XX4 4008 aa10.67□□□□□ -0.7
CCDC58-207ENST00000498466 MCRIP1C9JLW8 97 aa10.67□□□□□ -0.7
CCDC58-207ENST00000498466 NDUFA3O95167 84 aa10.67□□□□□ -0.7
CCDC58-207ENST00000498466 FASP25445 335 aa10.67□□□□□ -0.7
CCDC58-207ENST00000498466 CD40LGP29965 261 aa10.67□□□□□ -0.7
CCDC58-207ENST00000498466 ZNF93P35789 620 aaPredicted RBP10.67□□□□□ -0.7
CCDC58-207ENST00000498466 CRIP2P52943 208 aaPredicted RBP10.67□□□□□ -0.7
CCDC58-207ENST00000498466 TPPP2P59282 170 aa10.67□□□□□ -0.7
CCDC58-207ENST00000498466 ADARB1P78563 741 aaKnown RBP10.67□□□□□ -0.7
CCDC58-207ENST00000498466 TMEM267Q0VDI3 215 aaPredicted RBP10.67□□□□□ -0.7
CCDC58-207ENST00000498466 PLGLAQ15195 96 aa10.67□□□□□ -0.7
CCDC58-207ENST00000498466 MORN2Q502X0 79 aa10.67□□□□□ -0.7
CCDC58-207ENST00000498466 ZNF660Q6AZW8 331 aaPredicted RBP10.67□□□□□ -0.7
CCDC58-207ENST00000498466 AMIGO2Q86SJ2 522 aa10.67□□□□□ -0.7
CCDC58-207ENST00000498466 CCDC197Q8NCU1 140 aa10.67□□□□□ -0.7
CCDC58-207ENST00000498466 JAM3Q9BX67 310 aa10.67□□□□□ -0.7
CCDC58-207ENST00000498466 RETNQ9HD89 108 aa10.67□□□□□ -0.7
CCDC58-207ENST00000498466 ETAA1Q9NY74 926 aa10.67□□□□□ -0.7
CCDC58-207ENST00000498466 A0A1W2PP11 408 aa10.66□□□□□ -0.7
CCDC58-207ENST00000498466 E9PI62 339 aa10.66□□□□□ -0.7
CCDC58-207ENST00000498466 H0Y980 276 aa10.66□□□□□ -0.7
CCDC58-207ENST00000498466 ZNF780AO75290 641 aaPredicted RBP10.66□□□□□ -0.7
CCDC58-207ENST00000498466 GTF2F2P13984 249 aa10.66□□□□□ -0.7
CCDC58-207ENST00000498466 RCC1P18754 421 aaPredicted RBP10.66□□□□□ -0.7
CCDC58-207ENST00000498466 CX3CL1P78423 397 aa10.66□□□□□ -0.7
CCDC58-207ENST00000498466 RAB40BQ12829 278 aa10.66□□□□□ -0.7
CCDC58-207ENST00000498466 GNMTQ14749 295 aa10.66□□□□□ -0.7
CCDC58-207ENST00000498466 SLC22A6Q4U2R8 563 aa10.66□□□□□ -0.7
CCDC58-207ENST00000498466 ACTBL2Q562R1 376 aa10.66□□□□□ -0.7
CCDC58-207ENST00000498466 DDI2Q5TDH0 399 aa10.66□□□□□ -0.7
CCDC58-207ENST00000498466 TRAT1Q6PIZ9 186 aa10.66□□□□□ -0.7
CCDC58-207ENST00000498466 GTSCR1Q86UQ5 136 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms