RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 SAMD12Q8N8I0 201 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 OR13A1Q8NGR1 328 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 OR10R2Q8NGX6 335 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 MRGPRDQ8TDS7 321 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 ACOT12Q8WYK0 555 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 SLC25A38Q96DW6 304 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 RAB3CQ96E17 227 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 ARHGAP5-AS1Q96IT6 56 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 SULT4A1Q9BR01 284 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 PECRQ9BY49 303 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 ZNF286AQ9HBT8 521 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 CHMP1AQ9HD42 196 aaPredicted RBP12.34□□□□□ -0.43
NUP50-219ENST00000497960 COMMD3Q9UBI1 195 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 FOXI3A8MTJ6 420 aaPredicted RBP12.33□□□□□ -0.44
NUP50-219ENST00000497960 ZNF701M0R085 212 aaPredicted RBP12.33□□□□□ -0.44
NUP50-219ENST00000497960 IGLV1-47P01700 117 aa12.33□□□□□ -0.44
NUP50-219ENST00000497960 CGB3P0DN86 165 aa12.33□□□□□ -0.44
NUP50-219ENST00000497960 CGB7P0DN87 165 aa12.33□□□□□ -0.44
NUP50-219ENST00000497960 MRPS15P82914 257 aaKnown RBP12.33□□□□□ -0.44
NUP50-219ENST00000497960 HERPUD1Q15011 391 aa12.33□□□□□ -0.44
NUP50-219ENST00000497960 HLA-DRB5Q30154 266 aa12.33□□□□□ -0.44
NUP50-219ENST00000497960 ZNF497Q6ZNH5 498 aa12.33□□□□□ -0.44
NUP50-219ENST00000497960 OR9G1Q8NH87 305 aa12.33□□□□□ -0.44
NUP50-219ENST00000497960 DYNC2LI1Q8TCX1 351 aa12.33□□□□□ -0.44
NUP50-219ENST00000497960 KIRREL1Q96J84 757 aa12.33□□□□□ -0.44
NUP50-219ENST00000497960 CYYR1Q96J86 154 aa12.33□□□□□ -0.44
NUP50-219ENST00000497960 FAAP24Q9BTP7 215 aa12.33□□□□□ -0.44
NUP50-219ENST00000497960 PRSS22Q9GZN4 317 aa12.33□□□□□ -0.44
NUP50-219ENST00000497960 IDI2-AS1Q9NZ38 188 aa12.33□□□□□ -0.44
NUP50-219ENST00000497960 BUB1B-PAK6H3BSN5 160 aa12.32□□□□□ -0.44
NUP50-219ENST00000497960 RAB27BO00194 218 aa12.32□□□□□ -0.44
NUP50-219ENST00000497960 CA11O75493 328 aa12.32□□□□□ -0.44
NUP50-219ENST00000497960 HIST1H1DP16402 221 aaKnown RBP12.32□□□□□ -0.44
NUP50-219ENST00000497960 CCDC144NLQ6NUI1 221 aa12.32□□□□□ -0.44
NUP50-219ENST00000497960 KLHDC1Q8N7A1 406 aa12.32□□□□□ -0.44
NUP50-219ENST00000497960 OR10A7Q8NGE5 316 aa12.32□□□□□ -0.44
NUP50-219ENST00000497960 OR4K15Q8NH41 348 aa12.32□□□□□ -0.44
NUP50-219ENST00000497960 RFESDQ8TAC1 157 aa12.32□□□□□ -0.44
NUP50-219ENST00000497960 CAPSLQ8WWF8 208 aa12.32□□□□□ -0.44
NUP50-219ENST00000497960 DCUN1D5Q9BTE7 237 aa12.32□□□□□ -0.44
NUP50-219ENST00000497960 MMP27Q9H306 513 aa12.32□□□□□ -0.44
NUP50-219ENST00000497960 LINC00574Q9H8X3 128 aa12.32□□□□□ -0.44
NUP50-219ENST00000497960 ZNF702PQ9H963 129 aa12.32□□□□□ -0.44
NUP50-219ENST00000497960 NDUFA13Q9P0J0 144 aa12.32□□□□□ -0.44
NUP50-219ENST00000497960 AK3Q9UIJ7 227 aa12.32□□□□□ -0.44
NUP50-219ENST00000497960 TRAPPC2LQ9UL33 140 aa12.32□□□□□ -0.44
NUP50-219ENST00000497960 HSF4Q9ULV5 492 aa12.32□□□□□ -0.44
NUP50-219ENST00000497960 AMMECR1Q9Y4X0 333 aaPredicted RBP12.32□□□□□ -0.44
NUP50-219ENST00000497960 DPPA5A6NC42 116 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 OOSP1A8MZH6 123 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 NPIPB11E5RHQ5 1161 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 MFNGO00587 321 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 PEX14O75381 377 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 CD3GP09693 182 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 VSIG10L2P0DP72 767 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 GNB3P16520 340 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 GZMHP20718 246 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 MNDAP41218 407 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 TMEM50BP56557 158 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 ARL6IP1Q15041 203 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 LTC4SQ16873 150 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 C2orf68Q2NKX9 166 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 ARSJQ5FYB0 599 aaPredicted RBP12.31□□□□□ -0.44
NUP50-219ENST00000497960 PLAC9Q5JTB6 97 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 C6orf183Q5T699 404 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 TPTE2P1Q5T6R2 138 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 C16orf82Q7Z2V1 217 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 Q8N2B8 174 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 SETD6Q8TBK2 473 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 CCDC107Q8WV48 283 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 RPEQ96AT9 228 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 AKR1E2Q96JD6 320 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 CMSS1Q9BQ75 279 aaKnown RBP12.31□□□□□ -0.44
NUP50-219ENST00000497960 MMP28Q9H239 520 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 C12orf4Q9NQ89 552 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 DIABLOQ9NR28 239 aa12.31□□□□□ -0.44
NUP50-219ENST00000497960 A0A0A6YYH2 397 aa12.3□□□□□ -0.44
NUP50-219ENST00000497960 TRAV39A0A0B4J263 110 aa12.3□□□□□ -0.44
NUP50-219ENST00000497960 A6NJ64 397 aa12.3□□□□□ -0.44
NUP50-219ENST00000497960 FAM25AB3EWG3 89 aa12.3□□□□□ -0.44
NUP50-219ENST00000497960 FAM25CB3EWG5 89 aa12.3□□□□□ -0.44
NUP50-219ENST00000497960 FAM25GB3EWG6 89 aa12.3□□□□□ -0.44
NUP50-219ENST00000497960 J3QR06 171 aa12.3□□□□□ -0.44
NUP50-219ENST00000497960 HPGDSO60760 199 aa12.3□□□□□ -0.44
NUP50-219ENST00000497960 EIF4EP06730 217 aaKnown RBP12.3□□□□□ -0.44
NUP50-219ENST00000497960 SSTR5P35346 364 aa12.3□□□□□ -0.44
NUP50-219ENST00000497960 TRAT1Q6PIZ9 186 aa12.3□□□□□ -0.44
NUP50-219ENST00000497960 MOB1BQ7L9L4 216 aa12.3□□□□□ -0.44
NUP50-219ENST00000497960 MRPL30Q8TCC3 161 aaKnown RBP12.3□□□□□ -0.44
NUP50-219ENST00000497960 HDHD3Q9BSH5 251 aaPredicted RBP12.3□□□□□ -0.44
NUP50-219ENST00000497960 C6orf62Q9GZU0 229 aaPredicted RBP12.3□□□□□ -0.44
NUP50-219ENST00000497960 ABCG5Q9H222 651 aa12.3□□□□□ -0.44
NUP50-219ENST00000497960 TRRAPQ9Y4A5 3859 aa12.3□□□□□ -0.44
NUP50-219ENST00000497960 SERPINE3A8MV23 424 aa12.29□□□□□ -0.44
NUP50-219ENST00000497960 LY6LH3BQJ8 138 aa12.29□□□□□ -0.44
NUP50-219ENST00000497960 RGS5O15539 181 aa12.29□□□□□ -0.44
NUP50-219ENST00000497960 IGHV3-7P01780 117 aa12.29□□□□□ -0.44
NUP50-219ENST00000497960 MT-ND4P03905 459 aa12.29□□□□□ -0.44
NUP50-219ENST00000497960 CSF1P09603 554 aa12.29□□□□□ -0.44
NUP50-219ENST00000497960 CD24P25063 80 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms