RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 IGHV4-38-2P0DP08 117 aa16.34■□□□□ 0.21
CTSD-206ENST00000497544 UBE2E1P51965 193 aa16.34■□□□□ 0.21
CTSD-206ENST00000497544 BPIFB3P59826 476 aa16.34■□□□□ 0.21
CTSD-206ENST00000497544 PYHIN1Q6K0P9 492 aa16.34■□□□□ 0.21
CTSD-206ENST00000497544 OR6Q1Q8NGQ2 317 aa16.34■□□□□ 0.21
CTSD-206ENST00000497544 GCDHQ92947 438 aaPredicted RBP16.34■□□□□ 0.21
CTSD-206ENST00000497544 ABHD1Q96SE0 405 aa16.34■□□□□ 0.21
CTSD-206ENST00000497544 MS4A7Q9GZW8 240 aaPredicted RBP16.34■□□□□ 0.21
CTSD-206ENST00000497544 IFT46Q9NQC8 304 aa16.34■□□□□ 0.21
CTSD-206ENST00000497544 GFOD1Q9NXC2 390 aa16.34■□□□□ 0.21
CTSD-206ENST00000497544 GNG12Q9UBI6 72 aa16.34■□□□□ 0.21
CTSD-206ENST00000497544 FAM172BPA6NC97 362 aa16.33■□□□□ 0.2
CTSD-206ENST00000497544 MEIS3P1A6NDR6 274 aa16.33■□□□□ 0.2
CTSD-206ENST00000497544 SULT1C2O00338 296 aa16.33■□□□□ 0.2
CTSD-206ENST00000497544 TOR1AO14656 332 aa16.33■□□□□ 0.2
CTSD-206ENST00000497544 FABP7O15540 132 aa16.33■□□□□ 0.2
CTSD-206ENST00000497544 GSTT2P0CG29 244 aa16.33■□□□□ 0.2
CTSD-206ENST00000497544 GSTT2BP0CG30 244 aa16.33■□□□□ 0.2
CTSD-206ENST00000497544 FAM157CP0CG43 387 aa16.33■□□□□ 0.2
CTSD-206ENST00000497544 PRRX1P54821 245 aa16.33■□□□□ 0.2
CTSD-206ENST00000497544 LGALS4P56470 323 aa16.33■□□□□ 0.2
CTSD-206ENST00000497544 HTD2P86397 168 aa16.33■□□□□ 0.2
CTSD-206ENST00000497544 SRSF2Q01130 221 aaKnown RBP16.33■□□□□ 0.2
CTSD-206ENST00000497544 HCP5Q6MZN7 132 aa16.33■□□□□ 0.2
CTSD-206ENST00000497544 FAM131AQ6UXB0 335 aa16.33■□□□□ 0.2
CTSD-206ENST00000497544 Q6ZS49 121 aa16.33■□□□□ 0.2
CTSD-206ENST00000497544 HOGA1Q86XE5 327 aa16.33■□□□□ 0.2
CTSD-206ENST00000497544 GVQW1Q8N7I0 195 aa16.33■□□□□ 0.2
CTSD-206ENST00000497544 OR4A4PQ8NGN8 299 aa16.33■□□□□ 0.2
CTSD-206ENST00000497544 CLEC7AQ9BXN2 247 aa16.33■□□□□ 0.2
CTSD-206ENST00000497544 SCPEP1Q9HB40 452 aa16.33■□□□□ 0.2
CTSD-206ENST00000497544 A0A087X0M5 115 aa16.32■□□□□ 0.2
CTSD-206ENST00000497544 IGHV2-26A0A0B4J1V2 119 aa16.32■□□□□ 0.2
CTSD-206ENST00000497544 A0A1B0GX30 115 aa16.32■□□□□ 0.2
CTSD-206ENST00000497544 MEIOCA2RUB1 952 aa16.32■□□□□ 0.2
CTSD-206ENST00000497544 HSPA12AO43301 675 aa16.32■□□□□ 0.2
CTSD-206ENST00000497544 FSHBP01225 129 aa16.32■□□□□ 0.2
CTSD-206ENST00000497544 ARG1P05089 322 aa16.32■□□□□ 0.2
CTSD-206ENST00000497544 LPLP06858 475 aa16.32■□□□□ 0.2
CTSD-206ENST00000497544 CD34P28906 385 aa16.32■□□□□ 0.2
CTSD-206ENST00000497544 LOXL3P58215 753 aa16.32■□□□□ 0.2
CTSD-206ENST00000497544 BEST4Q8NFU0 473 aa16.32■□□□□ 0.2
CTSD-206ENST00000497544 OR52L2PQ8NGH6 319 aa16.32■□□□□ 0.2
CTSD-206ENST00000497544 OR10V1Q8NGI7 309 aa16.32■□□□□ 0.2
CTSD-206ENST00000497544 GPX8Q8TED1 209 aa16.32■□□□□ 0.2
CTSD-206ENST00000497544 JPT1Q9UK76 154 aa16.32■□□□□ 0.2
CTSD-206ENST00000497544 IGKV1D-8A0A087WSZ0 117 aa16.31■□□□□ 0.2
CTSD-206ENST00000497544 NPFFO15130 113 aa16.31■□□□□ 0.2
CTSD-206ENST00000497544 RGS11O94810 467 aa16.31■□□□□ 0.2
CTSD-206ENST00000497544 IGHV3-7P01780 117 aa16.31■□□□□ 0.2
CTSD-206ENST00000497544 FCER2P06734 321 aa16.31■□□□□ 0.2
CTSD-206ENST00000497544 SRD5A1P18405 259 aa16.31■□□□□ 0.2
CTSD-206ENST00000497544 MRPS10P82664 201 aaKnown RBP16.31■□□□□ 0.2
CTSD-206ENST00000497544 RNASE12Q5GAN4 147 aaKnown RBP16.31■□□□□ 0.2
CTSD-206ENST00000497544 SPANXN2Q5MJ10 180 aa16.31■□□□□ 0.2
CTSD-206ENST00000497544 STEAP3Q658P3 488 aa16.31■□□□□ 0.2
CTSD-206ENST00000497544 RUSC1-AS1Q66K80 236 aa16.31■□□□□ 0.2
CTSD-206ENST00000497544 BRD3OSQ6XYD6 125 aa16.31■□□□□ 0.2
CTSD-206ENST00000497544 CCDC190Q86UF4 302 aa16.31■□□□□ 0.2
CTSD-206ENST00000497544 OR11H6Q8NGC7 330 aa16.31■□□□□ 0.2
CTSD-206ENST00000497544 OR9G1Q8NH87 305 aa16.31■□□□□ 0.2
CTSD-206ENST00000497544 ZNF596Q8TC21 504 aa16.31■□□□□ 0.2
CTSD-206ENST00000497544 FCAMRQ8WWV6 532 aa16.31■□□□□ 0.2
CTSD-206ENST00000497544 LEAP2Q969E1 77 aa16.31■□□□□ 0.2
CTSD-206ENST00000497544 PTTG2Q9NZH5 202 aa16.31■□□□□ 0.2
CTSD-206ENST00000497544 SLC23A1Q9UHI7 598 aa16.31■□□□□ 0.2
CTSD-206ENST00000497544 PSG11Q9UQ72 335 aa16.31■□□□□ 0.2
CTSD-206ENST00000497544 YPEL1O60688 119 aa16.3■□□□□ 0.2
CTSD-206ENST00000497544 RBBP9O75884 186 aa16.3■□□□□ 0.2
CTSD-206ENST00000497544 ZBTB25P24278 435 aa16.3■□□□□ 0.2
CTSD-206ENST00000497544 GNG10P50151 68 aa16.3■□□□□ 0.2
CTSD-206ENST00000497544 ARPC4P59998 168 aa16.3■□□□□ 0.2
CTSD-206ENST00000497544 SCGB2A2Q13296 93 aa16.3■□□□□ 0.2
CTSD-206ENST00000497544 MORN2Q502X0 79 aa16.3■□□□□ 0.2
CTSD-206ENST00000497544 YPEL2Q96QA6 119 aa16.3■□□□□ 0.2
CTSD-206ENST00000497544 SOSTQ9BQB4 213 aa16.3■□□□□ 0.2
CTSD-206ENST00000497544 ZNF69Q9UC07 566 aa16.3■□□□□ 0.2
CTSD-206ENST00000497544 ANXA10Q9UJ72 324 aa16.3■□□□□ 0.2
CTSD-206ENST00000497544 GABARAPH6UMI1 98 aa16.29■□□□□ 0.2
CTSD-206ENST00000497544 J3QR06 171 aa16.29■□□□□ 0.2
CTSD-206ENST00000497544 BET1O15155 118 aa16.29■□□□□ 0.2
CTSD-206ENST00000497544 CTDSPLO15194 276 aa16.29■□□□□ 0.2
CTSD-206ENST00000497544 CTXN2P0C2S0 81 aa16.29■□□□□ 0.2
CTSD-206ENST00000497544 EPHA1P21709 976 aa16.29■□□□□ 0.2
CTSD-206ENST00000497544 CEACAM6P40199 344 aa16.29■□□□□ 0.2
CTSD-206ENST00000497544 Q3ZCU0 254 aa16.29■□□□□ 0.2
CTSD-206ENST00000497544 MIDNQ504T8 468 aa16.29■□□□□ 0.2
CTSD-206ENST00000497544 IGSF11Q5DX21 431 aa16.29■□□□□ 0.2
CTSD-206ENST00000497544 UTF1Q5T230 341 aa16.29■□□□□ 0.2
CTSD-206ENST00000497544 ZNF626Q68DY1 528 aa16.29■□□□□ 0.2
CTSD-206ENST00000497544 FAM53AQ6NSI3 398 aaPredicted RBP16.29■□□□□ 0.2
CTSD-206ENST00000497544 OR52I2Q8NH67 350 aa16.29■□□□□ 0.2
CTSD-206ENST00000497544 OR10J5Q8NHC4 309 aa16.29■□□□□ 0.2
CTSD-206ENST00000497544 PTBP1P26599 531 aaKnown RBP eCLIP16.28■□□□□ 0.2
CTSD-206ENST00000497544 PPP1CCP36873 323 aaKnown RBP16.28■□□□□ 0.2
CTSD-206ENST00000497544 GNMTQ14749 295 aa16.28■□□□□ 0.2
CTSD-206ENST00000497544 PYDC2Q56P42 97 aa16.28■□□□□ 0.2
CTSD-206ENST00000497544 PIP4P2Q8N4L2 257 aa16.28■□□□□ 0.2
CTSD-206ENST00000497544 BEND2Q8NDZ0 799 aa16.28■□□□□ 0.2
CTSD-206ENST00000497544 C22orf15Q8WYQ4 148 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms