RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 A0A1W2PPE3 182 aa13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 ERICH4A6NGS2 130 aa13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 MCRIP1C9JLW8 97 aa13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 AIPO00170 330 aa13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 GEMIN2O14893 280 aaKnown RBP13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 LANCL1O43813 399 aa13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 CD1AP06126 327 aa13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 OR8U8P0C7N1 319 aa13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 REG1BP48304 166 aa13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 AQP4P55087 323 aa13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 WNT4P56705 351 aa13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 Q499Y3 187 aa13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 ATAD3CQ5T2N8 411 aa13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 RNLSQ5VYX0 342 aa13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 GAPTQ8N292 157 aa13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 NEK7Q8TDX7 302 aa13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 PGLYRP3Q96LB9 341 aa13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 GNG12Q9UBI6 72 aa13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 SCOCQ9UIL1 159 aa13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 FAM90A10PA6NDY2 464 aa13.17□□□□□ -0.3
TRAPPC3-207ENST00000497251 FAM90A7PA6NKC0 464 aa13.17□□□□□ -0.3
TRAPPC3-207ENST00000497251 FAM90A23PA8MXZ1 464 aa13.17□□□□□ -0.3
TRAPPC3-207ENST00000497251 ECI1P42126 302 aa13.17□□□□□ -0.3
TRAPPC3-207ENST00000497251 RPS11P62280 158 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRAPPC3-207ENST00000497251 RIPK1Q13546 671 aa13.17□□□□□ -0.3
TRAPPC3-207ENST00000497251 C6orf141Q5SZD1 244 aa13.17□□□□□ -0.3
TRAPPC3-207ENST00000497251 TMEM65Q6PI78 240 aa13.17□□□□□ -0.3
TRAPPC3-207ENST00000497251 NANOGP1Q8N7R0 232 aa13.17□□□□□ -0.3
TRAPPC3-207ENST00000497251 MYOZ3Q8TDC0 251 aa13.17□□□□□ -0.3
TRAPPC3-207ENST00000497251 DUX3Q96PT4 197 aa13.17□□□□□ -0.3
TRAPPC3-207ENST00000497251 RCC2Q9P258 522 aaKnown RBP13.17□□□□□ -0.3
TRAPPC3-207ENST00000497251 TRAPPC2LQ9UL33 140 aa13.17□□□□□ -0.3
TRAPPC3-207ENST00000497251 ERGIC3Q9Y282 383 aa13.17□□□□□ -0.3
TRAPPC3-207ENST00000497251 ZNF256Q9Y2P7 627 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC3-207ENST00000497251 LRRC42Q9Y546 428 aa13.17□□□□□ -0.3
TRAPPC3-207ENST00000497251 TRAV39A0A0B4J263 110 aa13.16□□□□□ -0.3
TRAPPC3-207ENST00000497251 CDK1P06493 297 aa13.16□□□□□ -0.3
TRAPPC3-207ENST00000497251 IGFBP3P17936 291 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC3-207ENST00000497251 FSTP19883 344 aa13.16□□□□□ -0.3
TRAPPC3-207ENST00000497251 SERPINA2P20848 420 aa13.16□□□□□ -0.3
TRAPPC3-207ENST00000497251 LUMP51884 338 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC3-207ENST00000497251 LY6G6FQ5SQ64 297 aa13.16□□□□□ -0.3
TRAPPC3-207ENST00000497251 ZNF429Q86V71 674 aa13.16□□□□□ -0.3
TRAPPC3-207ENST00000497251 ZNF439Q8NDP4 499 aa13.16□□□□□ -0.3
TRAPPC3-207ENST00000497251 THRSPQ92748 146 aa13.16□□□□□ -0.3
TRAPPC3-207ENST00000497251 KCTD7Q96MP8 289 aa13.16□□□□□ -0.3
TRAPPC3-207ENST00000497251 SCN3BQ9NY72 215 aa13.16□□□□□ -0.3
TRAPPC3-207ENST00000497251 ZNF107Q9UII5 783 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC3-207ENST00000497251 VSIG4Q9Y279 399 aa13.16□□□□□ -0.3
TRAPPC3-207ENST00000497251 MYF6P23409 242 aa13.15□□□□□ -0.3
TRAPPC3-207ENST00000497251 VHLP40337 213 aa13.15□□□□□ -0.3
TRAPPC3-207ENST00000497251 HSPA13P48723 471 aa13.15□□□□□ -0.3
TRAPPC3-207ENST00000497251 DEFB136Q30KP8 78 aa13.15□□□□□ -0.3
TRAPPC3-207ENST00000497251 SLC22A6Q4U2R8 563 aa13.15□□□□□ -0.3
TRAPPC3-207ENST00000497251 CT45A1Q5HYN5 189 aa13.15□□□□□ -0.3
TRAPPC3-207ENST00000497251 FAM27D1Q5T7N8 215 aa13.15□□□□□ -0.3
TRAPPC3-207ENST00000497251 SYT6Q5T7P8 510 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC3-207ENST00000497251 ZFP41Q8N8Y5 198 aa13.15□□□□□ -0.3
TRAPPC3-207ENST00000497251 OR11H1Q8NG94 326 aa13.15□□□□□ -0.3
TRAPPC3-207ENST00000497251 OR13C5Q8NGS8 318 aa13.15□□□□□ -0.3
TRAPPC3-207ENST00000497251 CT45A3Q8NHU0 189 aa13.15□□□□□ -0.3
TRAPPC3-207ENST00000497251 CCDC107Q8WV48 283 aa13.15□□□□□ -0.3
TRAPPC3-207ENST00000497251 ZNF184Q99676 751 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC3-207ENST00000497251 MND1Q9BWT6 205 aa13.15□□□□□ -0.3
TRAPPC3-207ENST00000497251 ANKRD60Q9BZ19 345 aa13.15□□□□□ -0.3
TRAPPC3-207ENST00000497251 ETAA1Q9NY74 926 aa13.15□□□□□ -0.3
TRAPPC3-207ENST00000497251 SMAD5-AS1Q9Y6J3 95 aa13.15□□□□□ -0.3
TRAPPC3-207ENST00000497251 TRBV5-7A0A0A0MS05 114 aa13.14□□□□□ -0.31
TRAPPC3-207ENST00000497251 C12orf77C9JDV5 145 aa13.14□□□□□ -0.31
TRAPPC3-207ENST00000497251 SC5DO75845 299 aa13.14□□□□□ -0.31
TRAPPC3-207ENST00000497251 CELP19835 753 aa13.14□□□□□ -0.31
TRAPPC3-207ENST00000497251 PPIFP30405 207 aaKnown RBP13.14□□□□□ -0.31
TRAPPC3-207ENST00000497251 F2RL1P55085 397 aa13.14□□□□□ -0.31
TRAPPC3-207ENST00000497251 ZNF616Q08AN1 781 aa13.14□□□□□ -0.31
TRAPPC3-207ENST00000497251 ZNF260Q3ZCT1 412 aa13.14□□□□□ -0.31
TRAPPC3-207ENST00000497251 NKAPLQ5M9Q1 402 aa13.14□□□□□ -0.31
TRAPPC3-207ENST00000497251 PRR25Q96S07 402 aa13.14□□□□□ -0.31
TRAPPC3-207ENST00000497251 HSPB9Q9BQS6 159 aa13.14□□□□□ -0.31
TRAPPC3-207ENST00000497251 KCNIP1Q9NZI2 227 aa13.14□□□□□ -0.31
TRAPPC3-207ENST00000497251 TPRKBQ9Y3C4 175 aa13.14□□□□□ -0.31
TRAPPC3-207ENST00000497251 RYR3Q15413 4870 aa13.13□□□□□ -0.31
TRAPPC3-207ENST00000497251 PTGES3LE9PB15 166 aa13.13□□□□□ -0.31
TRAPPC3-207ENST00000497251 ARPC1BO15143 372 aaKnown RBP13.13□□□□□ -0.31
TRAPPC3-207ENST00000497251 RGS11O94810 467 aa13.13□□□□□ -0.31
TRAPPC3-207ENST00000497251 HLA-DRB1P01911 266 aa13.13□□□□□ -0.31
TRAPPC3-207ENST00000497251 HBZP02008 142 aa13.13□□□□□ -0.31
TRAPPC3-207ENST00000497251 MAPK3P27361 379 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC3-207ENST00000497251 ZNF134P52741 427 aa13.13□□□□□ -0.31
TRAPPC3-207ENST00000497251 HTD2P86397 168 aa13.13□□□□□ -0.31
TRAPPC3-207ENST00000497251 LSAMPQ13449 338 aa13.13□□□□□ -0.31
TRAPPC3-207ENST00000497251 MMDQ15546 238 aa13.13□□□□□ -0.31
TRAPPC3-207ENST00000497251 RAB12Q6IQ22 244 aa13.13□□□□□ -0.31
TRAPPC3-207ENST00000497251 ZNF491Q8N8L2 437 aa13.13□□□□□ -0.31
TRAPPC3-207ENST00000497251 OR1N2Q8NGR9 330 aa13.13□□□□□ -0.31
TRAPPC3-207ENST00000497251 OR14A2Q96R54 314 aa13.13□□□□□ -0.31
TRAPPC3-207ENST00000497251 OR51J1Q9H342 316 aa13.13□□□□□ -0.31
TRAPPC3-207ENST00000497251 OR2S2Q9NQN1 319 aa13.13□□□□□ -0.31
TRAPPC3-207ENST00000497251 MBNL3Q9NUK0 354 aaKnown RBP13.13□□□□□ -0.31
TRAPPC3-207ENST00000497251 JPT1Q9UK76 154 aa13.13□□□□□ -0.31
TRAPPC3-207ENST00000497251 IGHV3-43A0A0B4J1X8 118 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms