RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 REG1BP48304 166 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 GCLMP48507 274 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 ERFP50548 548 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 NCBP2P52298 156 aaKnown RBP eCLIP2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 RAB4BP61018 213 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 DYNLL1P63167 89 aaKnown RBP2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 RPL19P84098 196 aaKnown RBP2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 PRDX1Q06830 199 aaKnown RBP2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 TNFRSF9Q07011 255 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 ZNF235Q14590 738 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 PON3Q15166 354 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 SPA17Q15506 151 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 MAPK14Q16539 360 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 CDNFQ49AH0 187 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 TTC32Q5I0X7 151 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 OR2B11Q5JQS5 317 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 NHLRC3Q5JS37 347 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 C1orf195Q5TG92 126 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 GFI1BQ5VTD9 330 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 LEMD1Q68G75 181 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 TEX43Q6ZNM6 134 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 C16orf47Q6ZP98 133 aaPredicted RBP2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 FAM183BPQ6ZVS7 135 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 PEX26Q7Z412 305 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 OAFQ86UD1 273 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 CSNK1G2-AS1Q8NCQ2 148 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 OR1P1Q8NH06 330 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 MRGPRDQ8TDS7 321 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 FCRL1Q96LA6 429 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 SIGLEC12Q96PQ1 595 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 DUX3Q96PT4 197 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 FAAP24Q9BTP7 215 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 PCBD2Q9H0N5 130 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 FBXL15Q9H469 300 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 MYOZ1Q9NP98 299 aaPredicted RBP2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 RRAGDQ9NQL2 400 aaPredicted RBP2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 GLTPQ9NZD2 209 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 DNAJC27Q9NZQ0 273 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 DHRS4-AS1Q9P1J3 65 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 NYAP2Q9P242 653 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 PAK5Q9P286 719 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 VPREB3Q9UKI3 123 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 ORC6Q9Y5N6 252 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 DMBT1Q9UGM3 2413 aaPredicted RBP2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 RNF213Q63HN8 5207 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 LOXHD1Q8IVV2 1947 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 COL4A2P08572 1712 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 A0A1B0GXF2 115 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 H0Y9J4 135 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 PHYHO14832 338 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 SPAG7O75391 227 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 PTHP01270 115 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 IGHV3-48P01763 117 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 MT-ND4P03905 459 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 MMP7P09237 267 aaPredicted RBP2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 ERGP11308 486 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 COX6B1P14854 86 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 MYL9P24844 172 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 CCNE1P24864 410 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 SULT1A1P50225 295 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 SULT1A2P50226 295 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 PPOXP50336 477 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 ZNF138P52744 262 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 EGFEM1PQ0D2K5 195 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 INCA1Q0VD86 236 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 QPRTQ15274 297 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 RBMY1FQ15415 496 aaKnown RBP2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 FKBP1CQ5VVH2 108 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 TRIQKQ629K1 86 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 SFXN4Q6P4A7 337 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 TMED4Q7Z7H5 227 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 CATSPER3Q86XQ3 398 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 KRTAP7-1Q8IUC3 87 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 ZCCHC24Q8N2G6 241 aaKnown RBP2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 LRRC25Q8N386 305 aaPredicted RBP2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 TMEM86BQ8N661 226 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 TMEM252Q8N6L7 170 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 C4orf32Q8N8J7 132 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 OR51D1Q8NGF3 324 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 OR10J5Q8NHC4 309 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 VN1R17PQ8TDU5 208 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 GEMIN6Q8WXD5 167 aaKnown RBP2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 ASB17Q8WXJ9 295 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 IL22RA2Q969J5 263 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 YIPF5Q969M3 257 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 ZNF689Q96CS4 500 aaPredicted RBP2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 IMP4Q96G21 291 aaKnown RBP2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 ZNF597Q96LX8 424 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 PHB2Q99623 299 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 TMED9Q9BVK6 235 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 OR51E2Q9H255 320 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 C12orf10Q9HB07 376 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 SCRT2Q9NQ03 307 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 RBFOX1Q9NWB1 397 aaKnown RBP2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 ZNF226Q9NYT6 803 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 VPS29Q9UBQ0 182 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 ZNF629Q9UEG4 869 aaPredicted RBP2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 TRAPPC4Q9Y296 219 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 TP53TG5Q9Y2B4 290 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms