RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 RAB5CP51148 216 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 BAXQ07812 192 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 TMEM252Q8N6L7 170 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 SEC11CQ9BY50 192 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 PARP12Q9H0J9 701 aaKnown RBP10.98□□□□□ -0.65
GARNL3-220ENST00000496711 SH3BGRL3Q9H299 93 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 UFSP2Q9NUQ7 469 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 PPP1R3CQ9UQK1 317 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 STRAPQ9Y3F4 350 aaKnown RBP10.98□□□□□ -0.65
GARNL3-220ENST00000496711 DMXL1Q9Y485 3027 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 OOEPA6NGQ2 149 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 RNF212BA8MTL3 300 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 NXPH3O95157 252 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 CRYABP02511 175 aaKnown RBP10.98□□□□□ -0.65
GARNL3-220ENST00000496711 OR8U9P0C7N5 309 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 OR3A1P47881 315 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 ID4P47928 161 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 CAMLGP49069 296 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 CLINT1Q14677 625 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 GUCA2BQ16661 112 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 PUSL1Q8N0Z8 303 aaKnown RBP10.98□□□□□ -0.65
GARNL3-220ENST00000496711 RBMXL3Q8N7X1 1067 aaKnown RBP10.98□□□□□ -0.65
GARNL3-220ENST00000496711 OR8U1Q8NH10 309 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 LSM10Q969L4 123 aaKnown RBP10.98□□□□□ -0.65
GARNL3-220ENST00000496711 GPR146Q96CH1 333 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 RNF115Q9Y4L5 304 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 PRRC2CQ9Y520 2896 aaKnown RBP10.97□□□□□ -0.65
GARNL3-220ENST00000496711 C12orf77C9JDV5 145 aa10.97□□□□□ -0.65
GARNL3-220ENST00000496711 PROB1E7EW31 1015 aa10.97□□□□□ -0.65
GARNL3-220ENST00000496711 NUPL2O15504 423 aaKnown RBP10.97□□□□□ -0.65
GARNL3-220ENST00000496711 PTBP3O95758 552 aaKnown RBP10.97□□□□□ -0.65
GARNL3-220ENST00000496711 IGKV1-39P01597 117 aa10.97□□□□□ -0.65
GARNL3-220ENST00000496711 IGKV1D-39P04432 117 aa10.97□□□□□ -0.65
GARNL3-220ENST00000496711 CD200P41217 278 aa10.97□□□□□ -0.65
GARNL3-220ENST00000496711 ASCL1P50553 236 aa10.97□□□□□ -0.65
GARNL3-220ENST00000496711 ZNF83P51522 516 aa10.97□□□□□ -0.65
GARNL3-220ENST00000496711 ZNF616Q08AN1 781 aa10.97□□□□□ -0.65
GARNL3-220ENST00000496711 TIMM23BQ5SRD1 257 aa10.97□□□□□ -0.65
GARNL3-220ENST00000496711 DRAM1Q8N682 238 aa10.97□□□□□ -0.65
GARNL3-220ENST00000496711 OR1L1Q8NH94 360 aa10.97□□□□□ -0.65
GARNL3-220ENST00000496711 SNIP1Q8TAD8 396 aaKnown RBP10.97□□□□□ -0.65
GARNL3-220ENST00000496711 S100PBPQ96BU1 408 aa10.97□□□□□ -0.65
GARNL3-220ENST00000496711 GALMQ96C23 342 aa10.97□□□□□ -0.65
GARNL3-220ENST00000496711 COQ2Q96H96 371 aa10.97□□□□□ -0.65
GARNL3-220ENST00000496711 CACFD1Q9UGQ2 172 aa10.97□□□□□ -0.65
GARNL3-220ENST00000496711 FAM74A7A6NL05 159 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 RNASEK-C17orf49H0YIS7 233 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 IFNL4K9M1U5 179 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 AGPAT2O15120 278 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 CHST1O43916 411 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 TMEM50AO95807 157 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 TSPAN15O95858 294 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 CD5P06127 495 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 ATF4P18848 351 aaPredicted RBP10.96□□□□□ -0.65
GARNL3-220ENST00000496711 OMGP23515 440 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 IL2RGP31785 369 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 GABRA2P47869 451 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 HOXA4Q00056 320 aaPredicted RBP10.96□□□□□ -0.65
GARNL3-220ENST00000496711 AESQ08117 197 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 FAM74A3Q4VXF1 159 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 MIDNQ504T8 468 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 ZNF474Q6S9Z5 364 aaPredicted RBP10.96□□□□□ -0.65
GARNL3-220ENST00000496711 ODF3L1Q8IXM7 274 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 RPRMLQ8N4K4 120 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 COMMD1Q8N668 190 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 ZNF645Q8N7E2 425 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 OR5C1Q8NGR4 320 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 LRRC29Q8WV35 223 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 C19orf12Q9NSK7 152 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 WASF3Q9UPY6 502 aa10.96□□□□□ -0.65
GARNL3-220ENST00000496711 M0R1B8 84 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 PRH1P02810 166 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 SFTA3P0C7M3 94 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 ZNF16P17020 682 aaPredicted RBP10.95□□□□□ -0.66
GARNL3-220ENST00000496711 CD80P33681 288 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 TIMP3P35625 211 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 DYNLT3P51808 116 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 DVL1P1P54792 670 aaPredicted RBP10.95□□□□□ -0.66
GARNL3-220ENST00000496711 COL10A1Q03692 680 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 C3orf36Q3SXR2 165 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 TMEM182Q6ZP80 229 aaPredicted RBP10.95□□□□□ -0.66
GARNL3-220ENST00000496711 ZBTB34Q8NCN2 500 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 OR2Z1Q8NG97 314 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 TMEM171Q8WVE6 324 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 TOLLIPQ9H0E2 274 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 CACNG5Q9UF02 275 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 CUL9Q8IWT3 2517 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 ZFHX4Q86UP3 3567 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 TRIM77I1YAP6 450 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 K7EM74 188 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 CST7O76096 145 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 SNAPINO95295 136 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 IGKV1-5P01602 117 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 HBZP02008 142 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 TFF1P04155 84 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 PAX9P55771 341 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 RPL23AP62750 156 aaKnown RBP10.95□□□□□ -0.66
GARNL3-220ENST00000496711 ZNF585BQ52M93 769 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 KRBOX4Q5JUW0 171 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 STX12Q86Y82 276 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms