RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 GPR157Q5UAW9 335 aa17.78■□□□□ 0.44
C9orf3-222ENST00000496567 Q8N402 240 aa17.78■□□□□ 0.44
C9orf3-222ENST00000496567 SNAPC3Q92966 411 aa17.78■□□□□ 0.44
C9orf3-222ENST00000496567 CABLES2Q9BTV7 478 aa17.78■□□□□ 0.44
C9orf3-222ENST00000496567 GSX1Q9H4S2 264 aaPredicted RBP17.78■□□□□ 0.44
C9orf3-222ENST00000496567 IGHV3-43A0A0B4J1X8 118 aa17.77■□□□□ 0.44
C9orf3-222ENST00000496567 RNASEK-C17orf49H0YIS7 233 aa17.77■□□□□ 0.44
C9orf3-222ENST00000496567 HSPA12AO43301 675 aa17.77■□□□□ 0.44
C9orf3-222ENST00000496567 RGS11O94810 467 aa17.77■□□□□ 0.44
C9orf3-222ENST00000496567 FCER2P06734 321 aa17.77■□□□□ 0.44
C9orf3-222ENST00000496567 IGHV3-43DP0DP04 118 aa17.77■□□□□ 0.44
C9orf3-222ENST00000496567 UBE2E1P51965 193 aa17.77■□□□□ 0.44
C9orf3-222ENST00000496567 Q3ZCU0 254 aa17.77■□□□□ 0.44
C9orf3-222ENST00000496567 IGSF11Q5DX21 431 aa17.77■□□□□ 0.44
C9orf3-222ENST00000496567 ABHD12Q8N2K0 398 aa17.77■□□□□ 0.44
C9orf3-222ENST00000496567 PNKDQ8N490 385 aa17.77■□□□□ 0.44
C9orf3-222ENST00000496567 GDPD1Q8N9F7 314 aa17.77■□□□□ 0.44
C9orf3-222ENST00000496567 OR5AP2Q8NGF4 316 aa17.77■□□□□ 0.44
C9orf3-222ENST00000496567 OR52L2PQ8NGH6 319 aa17.77■□□□□ 0.44
C9orf3-222ENST00000496567 CLEC7AQ9BXN2 247 aa17.77■□□□□ 0.44
C9orf3-222ENST00000496567 SRRQ9GZT4 340 aa17.77■□□□□ 0.44
C9orf3-222ENST00000496567 SLC23A1Q9UHI7 598 aa17.77■□□□□ 0.44
C9orf3-222ENST00000496567 TLN2Q9Y4G6 2542 aa17.77■□□□□ 0.43
C9orf3-222ENST00000496567 IGHV2-26A0A0B4J1V2 119 aa17.76■□□□□ 0.43
C9orf3-222ENST00000496567 TRAV40A0A0B4J280 105 aa17.76■□□□□ 0.43
C9orf3-222ENST00000496567 IGKV1-6A0A0C4DH72 117 aa17.76■□□□□ 0.43
C9orf3-222ENST00000496567 CENPVL3A0A0U1RRI6 287 aa17.76■□□□□ 0.43
C9orf3-222ENST00000496567 BET1O15155 118 aa17.76■□□□□ 0.43
C9orf3-222ENST00000496567 COX7A1P24310 79 aa17.76■□□□□ 0.43
C9orf3-222ENST00000496567 TAS2R46P59540 309 aa17.76■□□□□ 0.43
C9orf3-222ENST00000496567 KLRD1Q13241 179 aa17.76■□□□□ 0.43
C9orf3-222ENST00000496567 HERPUD1Q15011 391 aa17.76■□□□□ 0.43
C9orf3-222ENST00000496567 OR10J5Q8NHC4 309 aa17.76■□□□□ 0.43
C9orf3-222ENST00000496567 ZNF107Q9UII5 783 aaPredicted RBP17.76■□□□□ 0.43
C9orf3-222ENST00000496567 F8P00451 2351 aa17.76■□□□□ 0.43
C9orf3-222ENST00000496567 TRBV6-7A0A0A0MS04 114 aa17.75■□□□□ 0.43
C9orf3-222ENST00000496567 FAM172BPA6NC97 362 aa17.75■□□□□ 0.43
C9orf3-222ENST00000496567 YPEL1O60688 119 aa17.75■□□□□ 0.43
C9orf3-222ENST00000496567 BPIFB3P59826 476 aa17.75■□□□□ 0.43
C9orf3-222ENST00000496567 PRB3Q04118 309 aaPredicted RBP17.75■□□□□ 0.43
C9orf3-222ENST00000496567 HCP5Q6MZN7 132 aa17.75■□□□□ 0.43
C9orf3-222ENST00000496567 OR11H6Q8NGC7 330 aa17.75■□□□□ 0.43
C9orf3-222ENST00000496567 OR10V1Q8NGI7 309 aa17.75■□□□□ 0.43
C9orf3-222ENST00000496567 OR9G1Q8NH87 305 aa17.75■□□□□ 0.43
C9orf3-222ENST00000496567 YPEL2Q96QA6 119 aa17.75■□□□□ 0.43
C9orf3-222ENST00000496567 THAP7Q9BT49 309 aaPredicted RBP17.75■□□□□ 0.43
C9orf3-222ENST00000496567 NECAP2Q9NVZ3 263 aa17.75■□□□□ 0.43
C9orf3-222ENST00000496567 TAS2R8Q9NYW2 309 aa17.75■□□□□ 0.43
C9orf3-222ENST00000496567 RBMX2Q9Y388 322 aaKnown RBP17.75■□□□□ 0.43
C9orf3-222ENST00000496567 TOR1AO14656 332 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 CEACAM6P40199 344 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 OR3A3P47888 321 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 PPP5CP53041 499 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 PRRX1P54821 245 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 MORN2Q502X0 79 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 LY6G6FQ5SQ64 297 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 LYSMD2Q8IV50 215 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 PDZD9Q8IXQ8 264 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 ZNF596Q8TC21 504 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 ZFAND2BQ8WV99 257 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 GINS4Q9BRT9 223 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 PSG11Q9UQ72 335 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 IGHV1-69DA0A0B4J2H0 117 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 FSHBP01225 129 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 IGHV1-69P01742 117 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 CSF1P09603 554 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 HLA-DMAP28067 261 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 PPP1CCP36873 323 aaKnown RBP17.74■□□□□ 0.43
C9orf3-222ENST00000496567 GNMTQ14749 295 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 CDK10Q15131 360 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 ACTBL2Q562R1 376 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 KLF17Q5JT82 389 aaPredicted RBP17.74■□□□□ 0.43
C9orf3-222ENST00000496567 C8orf31Q8N9H6 132 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 OR5H2Q8NGV7 314 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 LEAP2Q969E1 77 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 BORCS5Q969J3 196 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 OR1A1Q9P1Q5 309 aa17.74■□□□□ 0.43
C9orf3-222ENST00000496567 ZNF736B4DX44 427 aaPredicted RBP17.73■□□□□ 0.43
C9orf3-222ENST00000496567 IGHV4-38-2P0DP08 117 aa17.73■□□□□ 0.43
C9orf3-222ENST00000496567 TBPP20226 339 aa17.73■□□□□ 0.43
C9orf3-222ENST00000496567 CD40LGP29965 261 aa17.73■□□□□ 0.43
C9orf3-222ENST00000496567 TAS2R19P59542 299 aa17.73■□□□□ 0.43
C9orf3-222ENST00000496567 ZNF626Q68DY1 528 aa17.73■□□□□ 0.43
C9orf3-222ENST00000496567 TMEM229BQ8NBD8 167 aa17.73■□□□□ 0.43
C9orf3-222ENST00000496567 EDARADDQ8WWZ3 215 aa17.73■□□□□ 0.43
C9orf3-222ENST00000496567 TOLLIPQ9H0E2 274 aa17.73■□□□□ 0.43
C9orf3-222ENST00000496567 NUP50Q9UKX7 468 aa17.73■□□□□ 0.43
C9orf3-222ENST00000496567 J3QR06 171 aa17.72■□□□□ 0.43
C9orf3-222ENST00000496567 IGHV3-7P01780 117 aa17.72■□□□□ 0.43
C9orf3-222ENST00000496567 ARG1P05089 322 aa17.72■□□□□ 0.43
C9orf3-222ENST00000496567 HRH1P35367 487 aa17.72■□□□□ 0.43
C9orf3-222ENST00000496567 SRP14P37108 136 aaKnown RBP17.72■□□□□ 0.43
C9orf3-222ENST00000496567 GNG10P50151 68 aa17.72■□□□□ 0.43
C9orf3-222ENST00000496567 LGALS4P56470 323 aa17.72■□□□□ 0.43
C9orf3-222ENST00000496567 UTF1Q5T230 341 aa17.72■□□□□ 0.43
C9orf3-222ENST00000496567 FAM53AQ6NSI3 398 aaPredicted RBP17.72■□□□□ 0.43
C9orf3-222ENST00000496567 Q71RC1 249 aaPredicted RBP17.72■□□□□ 0.43
C9orf3-222ENST00000496567 BEND2Q8NDZ0 799 aa17.72■□□□□ 0.43
C9orf3-222ENST00000496567 OR2AK2Q8NG84 335 aa17.72■□□□□ 0.43
C9orf3-222ENST00000496567 SDHCQ99643 169 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms