RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 IGHV2-26A0A0B4J1V2 119 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 C3orf85A0A1B0GTC6 90 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 A0A1W2PP11 408 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 BLACEA4D250 179 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 IFNL4K9M1U5 179 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 MLNRO43193 412 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 CTSEP14091 401 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 CRISP2P16562 243 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 HLA-BQ31612 363 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 LRRC10Q5BKY1 277 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 PLA2G2CQ5R387 149 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 PRR27Q6MZM9 219 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 VHLLQ6RSH7 139 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 C16orf54Q6UWD8 224 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 ZNF695Q8IW36 515 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 CA13Q8N1Q1 262 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 SIGLECL1Q8N7X8 197 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 SPSB1Q96BD6 273 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 DNAJA3Q96EY1 480 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 PATZ1Q9HBE1 687 aaKnown RBP7.8□□□□□ -1.16
HPS4-217ENST00000496385 FGF22Q9HCT0 170 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 TUBG2Q9NRH3 451 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 PLEKHJ1Q9NW61 149 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 MCTS1Q9ULC4 181 aaKnown RBP7.8□□□□□ -1.16
HPS4-217ENST00000496385 GOLGA4Q13439 2230 aaKnown RBP7.79□□□□□ -1.16
HPS4-217ENST00000496385 J3QR06 171 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 TMPRSS2O15393 492 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 MPPED1O15442 326 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 TRAPPC6AO75865 159 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 ONECUT2O95948 504 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 SLC25A6P12236 298 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 MYF5P13349 255 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 TSPOP30536 169 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 CDKN1AP38936 164 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 LDLRAD2Q5SZI1 272 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 C1orf185Q5T7R7 199 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 Q8N976 141 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 CCL4L1Q8NHW4 92 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 LOXL4Q96JB6 756 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 RAB40CQ96S21 281 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 SAMD10Q9BYL1 202 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 ELOVL5Q9NYP7 299 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 IL19Q9UHD0 177 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 TIMM9Q9Y5J7 89 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 A0A1W2PRS3 328 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 ZNF253O75346 499 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 MPZL1O95297 269 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 VDAC1P21796 283 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 ADMP35318 185 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 NXPH1P58417 271 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 FMODQ06828 376 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 ZNF154Q13106 437 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 KIR2DS3Q14952 304 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 PMCHL1Q16048 86 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 FAM78BQ5VT40 261 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 OTPQ5XKR4 325 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 SLC23A3Q6PIS1 610 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 UNQ5815/PRO19632Q6UWF5 114 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 CPEB2Q7Z5Q1 589 aaKnown RBP7.79□□□□□ -1.16
HPS4-217ENST00000496385 SFTPA2Q8IWL1 248 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 MCEMP1Q8IX19 187 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 METTL27Q8N6F8 245 aaPredicted RBP7.79□□□□□ -1.16
HPS4-217ENST00000496385 OR51E1Q8TCB6 317 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 OR1E3Q8WZA6 343 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 LHX4Q969G2 390 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 SIGLEC12Q96PQ1 595 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 SPACA5Q96QH8 159 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 LIME1Q9H400 295 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 ZNF430Q9H8G1 570 aaPredicted RBP7.79□□□□□ -1.16
HPS4-217ENST00000496385 SLC39A9Q9NUM3 307 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 TP53TG3Q9ULZ0 132 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 CNOT1A5YKK6 2376 aaKnown RBP7.79□□□□□ -1.16
HPS4-217ENST00000496385 CPAMD8Q8IZJ3 1885 aa7.79□□□□□ -1.16
HPS4-217ENST00000496385 TRBV9A0A0B4J1U6 114 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 IGLC7A0M8Q6 106 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 ZNF814B7Z6K7 855 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 M0QZ24 198 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 PLPP3O14495 311 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 RAMP3O60896 148 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 TNFSF15O95150 251 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 GPX1P07203 203 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 CTXN2P0C2S0 81 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 GABRA2P47869 451 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 LHX2P50458 406 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 ZP4Q12836 540 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 RNPS1Q15287 305 aaKnown RBP7.78□□□□□ -1.16
HPS4-217ENST00000496385 KISS1Q15726 138 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 VAMP3Q15836 100 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 PHLDA2Q53GA4 152 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 VWA1Q6PCB0 445 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 DGAT2L6Q6ZPD8 337 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 TMEM217Q8N7C4 229 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 NEIL1Q96FI4 390 aaPredicted RBP7.78□□□□□ -1.16
HPS4-217ENST00000496385 ZDHHC11Q9H8X9 412 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 CLN8Q9UBY8 286 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 NXT1Q9UKK6 140 aaKnown RBP7.78□□□□□ -1.16
HPS4-217ENST00000496385 B3GALT1Q9Y5Z6 326 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 HS3ST3A1Q9Y663 406 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 WDFY3Q8IZQ1 3526 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 SPTY2D1-AS1A0A0U1RR47 76 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms