RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 SLC31A2O15432 143 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 DUS4LO95620 317 aaKnown RBP10.07□□□□□ -0.8
PTPRF-214ENST00000496043 MPIG6BO95866 241 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 ZNF137PP52743 207 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 GP2P55259 537 aaKnown RBP10.07□□□□□ -0.8
PTPRF-214ENST00000496043 INSL4Q14641 139 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 MED22Q15528 200 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 MORN2Q502X0 79 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 C1orf100Q5SVJ3 147 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 Q6ZPA2 131 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 LRRTM1Q86UE6 522 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 Q8N6K4 173 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 ZNF439Q8NDP4 499 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 OR51D1Q8NGF3 324 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 OR8H1Q8NGG4 311 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 PHYHIPQ92561 330 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 FAM46BQ96A09 425 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 TMED9Q9BVK6 235 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 GON7Q9BXV9 100 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 ABCG5Q9H222 651 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 MBNL3Q9NUK0 354 aaKnown RBP10.07□□□□□ -0.8
PTPRF-214ENST00000496043 LIN7CQ9NUP9 197 aaKnown RBP10.07□□□□□ -0.8
PTPRF-214ENST00000496043 NKX1-2Q9UD57 310 aaPredicted RBP10.07□□□□□ -0.8
PTPRF-214ENST00000496043 LINC00527Q9UJ94 153 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 TPRKBQ9Y3C4 175 aa10.07□□□□□ -0.8
PTPRF-214ENST00000496043 LINC01548A6NM66 108 aa10.06□□□□□ -0.8
PTPRF-214ENST00000496043 AP4M1O00189 453 aa10.06□□□□□ -0.8
PTPRF-214ENST00000496043 VSIG8P0DPA2 414 aa10.06□□□□□ -0.8
PTPRF-214ENST00000496043 SLC6A1P30531 599 aa10.06□□□□□ -0.8
PTPRF-214ENST00000496043 RPL23AP62750 156 aaKnown RBP10.06□□□□□ -0.8
PTPRF-214ENST00000496043 HTD2P86397 168 aa10.06□□□□□ -0.8
PTPRF-214ENST00000496043 PNLIPRP3Q17RR3 467 aa10.06□□□□□ -0.8
PTPRF-214ENST00000496043 HSD17B12Q53GQ0 312 aa10.06□□□□□ -0.8
PTPRF-214ENST00000496043 NKAPLQ5M9Q1 402 aa10.06□□□□□ -0.8
PTPRF-214ENST00000496043 RBM48Q5RL73 367 aaKnown RBP10.06□□□□□ -0.8
PTPRF-214ENST00000496043 FAM27D1Q5T7N8 215 aa10.06□□□□□ -0.8
PTPRF-214ENST00000496043 TEX38Q6PEX7 206 aa10.06□□□□□ -0.8
PTPRF-214ENST00000496043 STPG2Q8N412 459 aa10.06□□□□□ -0.8
PTPRF-214ENST00000496043 Q8N9W7 124 aa10.06□□□□□ -0.8
PTPRF-214ENST00000496043 OR52L2PQ8NGH6 319 aa10.06□□□□□ -0.8
PTPRF-214ENST00000496043 KCNG3Q8TAE7 436 aa10.06□□□□□ -0.8
PTPRF-214ENST00000496043 S1PR3Q99500 378 aa10.06□□□□□ -0.8
PTPRF-214ENST00000496043 PLSCR3Q9NRY6 295 aa10.06□□□□□ -0.8
PTPRF-214ENST00000496043 AURKAIP1Q9NWT8 199 aaPredicted RBP10.06□□□□□ -0.8
PTPRF-214ENST00000496043 NUDT19A8MXV4 375 aa10.05□□□□□ -0.8
PTPRF-214ENST00000496043 ZNF736B4DX44 427 aaPredicted RBP10.05□□□□□ -0.8
PTPRF-214ENST00000496043 LANCL1O43813 399 aa10.05□□□□□ -0.8
PTPRF-214ENST00000496043 YPEL1O60688 119 aa10.05□□□□□ -0.8
PTPRF-214ENST00000496043 RGS11O94810 467 aa10.05□□□□□ -0.8
PTPRF-214ENST00000496043 CD37P11049 281 aa10.05□□□□□ -0.8
PTPRF-214ENST00000496043 HTR2CP28335 458 aa10.05□□□□□ -0.8
PTPRF-214ENST00000496043 MYCNOSP40205 109 aa10.05□□□□□ -0.8
PTPRF-214ENST00000496043 GPR12P47775 334 aa10.05□□□□□ -0.8
PTPRF-214ENST00000496043 RPS27AP62979 156 aaKnown RBP10.05□□□□□ -0.8
PTPRF-214ENST00000496043 OR10K2Q6IF99 312 aa10.05□□□□□ -0.8
PTPRF-214ENST00000496043 OR2W3Q7Z3T1 314 aa10.05□□□□□ -0.8
PTPRF-214ENST00000496043 MRPL30Q8TCC3 161 aaKnown RBP10.05□□□□□ -0.8
PTPRF-214ENST00000496043 UFD1Q92890 307 aa10.05□□□□□ -0.8
PTPRF-214ENST00000496043 GALMQ96C23 342 aa10.05□□□□□ -0.8
PTPRF-214ENST00000496043 YPEL2Q96QA6 119 aa10.05□□□□□ -0.8
PTPRF-214ENST00000496043 FAAP24Q9BTP7 215 aa10.05□□□□□ -0.8
PTPRF-214ENST00000496043 JPT1Q9UK76 154 aa10.05□□□□□ -0.8
PTPRF-214ENST00000496043 LSM2Q9Y333 95 aaKnown RBP10.05□□□□□ -0.8
PTPRF-214ENST00000496043 PRKDCP78527 4128 aaKnown RBP10.04□□□□□ -0.8
PTPRF-214ENST00000496043 UCHL1P09936 223 aa10.04□□□□□ -0.8
PTPRF-214ENST00000496043 CHATP28329 748 aa10.04□□□□□ -0.8
PTPRF-214ENST00000496043 THBS3P49746 956 aa10.04□□□□□ -0.8
PTPRF-214ENST00000496043 F2RL1P55085 397 aa10.04□□□□□ -0.8
PTPRF-214ENST00000496043 IRF3Q14653 427 aa10.04□□□□□ -0.8
PTPRF-214ENST00000496043 LY6G6FQ5SQ64 297 aa10.04□□□□□ -0.8
PTPRF-214ENST00000496043 LIPKQ5VXJ0 399 aa10.04□□□□□ -0.8
PTPRF-214ENST00000496043 MRPL41Q8IXM3 137 aaKnown RBP10.04□□□□□ -0.8
PTPRF-214ENST00000496043 LINC00482Q8N8I6 264 aa10.04□□□□□ -0.8
PTPRF-214ENST00000496043 TMEM203Q969S6 136 aa10.04□□□□□ -0.8
PTPRF-214ENST00000496043 SULT4A1Q9BR01 284 aa10.04□□□□□ -0.8
PTPRF-214ENST00000496043 TM2D1Q9BX74 207 aa10.04□□□□□ -0.8
PTPRF-214ENST00000496043 TMEM59Q9BXS4 323 aa10.04□□□□□ -0.8
PTPRF-214ENST00000496043 GPR61Q9BZJ8 451 aa10.04□□□□□ -0.8
PTPRF-214ENST00000496043 DUSP21Q9H596 190 aa10.04□□□□□ -0.8
PTPRF-214ENST00000496043 ISYNA1Q9NPH2 558 aa10.04□□□□□ -0.8
PTPRF-214ENST00000496043 PLEKHJ1Q9NW61 149 aa10.04□□□□□ -0.8
PTPRF-214ENST00000496043 ABRACLQ9P1F3 81 aa10.04□□□□□ -0.8
PTPRF-214ENST00000496043 TMEM14DPA8MWL7 114 aa10.03□□□□□ -0.8
PTPRF-214ENST00000496043 SLC22A1O15245 554 aa10.03□□□□□ -0.8
PTPRF-214ENST00000496043 RGS10O43665 173 aa10.03□□□□□ -0.8
PTPRF-214ENST00000496043 RRP9O43818 475 aaKnown RBP10.03□□□□□ -0.8
PTPRF-214ENST00000496043 BPNT1O95861 308 aa10.03□□□□□ -0.8
PTPRF-214ENST00000496043 HSMCR30P0CW71 290 aa10.03□□□□□ -0.8
PTPRF-214ENST00000496043 BLVRBP30043 206 aaPredicted RBP10.03□□□□□ -0.8
PTPRF-214ENST00000496043 SOX6P35712 828 aa10.03□□□□□ -0.8
PTPRF-214ENST00000496043 PPP1CCP36873 323 aaKnown RBP10.03□□□□□ -0.8
PTPRF-214ENST00000496043 AQP4P55087 323 aa10.03□□□□□ -0.8
PTPRF-214ENST00000496043 TPBGQ13641 420 aa10.03□□□□□ -0.8
PTPRF-214ENST00000496043 TRAM1Q15629 374 aa10.03□□□□□ -0.8
PTPRF-214ENST00000496043 C8orf86Q6ZUL3 223 aa10.03□□□□□ -0.8
PTPRF-214ENST00000496043 C6orf201Q7Z4U5 140 aa10.03□□□□□ -0.8
PTPRF-214ENST00000496043 C5orf24Q7Z6I8 188 aa10.03□□□□□ -0.8
PTPRF-214ENST00000496043 ZNF695Q8IW36 515 aa10.03□□□□□ -0.8
PTPRF-214ENST00000496043 OR6M1Q8NGM8 313 aa10.03□□□□□ -0.8
PTPRF-214ENST00000496043 NRG4Q8WWG1 115 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms