RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 C19orf12Q9NSK7 152 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 ZFP57Q9NU63 452 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 DCAF13Q9NV06 445 aaKnown RBP3.34□□□□□ -1.87
VPS52-222ENST00000495981 GID8Q9NWU2 228 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 VNN3Q9NY84 501 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 CD300AQ9UGN4 299 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 PRELID1Q9Y255 219 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 LRP12Q9Y561 859 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 V9GYQ6 96 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 MEIOCA2RUB1 952 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 BTBD17A6NE02 478 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 GGT3PA6NGU5 568 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 TMEM210A6NLX4 147 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 ODF3BA8MYP8 253 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 TSC22D2O75157 780 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 GADD45GO95257 159 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 SOX14O95416 240 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 IGLV3-1P01715 115 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 GYPBP06028 91 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 CD28P10747 220 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 COX4I1P13073 169 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 SPI1P17947 270 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 C4BPBP20851 252 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 ATP6V1B2P21281 511 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 CALB2P22676 271 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 RRM2P31350 389 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 MAGEA2P43356 314 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 KIR2DS4P43632 304 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 PPT1P50897 306 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 PRKXP51817 358 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 SLC25A1P53007 311 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 XGP55808 180 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 DLX6P56179 175 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 ZNF121P58317 390 aaPredicted RBP3.33□□□□□ -1.88
VPS52-222ENST00000495981 GRB2P62993 217 aaKnown RBP3.33□□□□□ -1.88
VPS52-222ENST00000495981 TSPAN31Q12999 210 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 MICBQ29980 383 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 FAM76BQ5HYJ3 339 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 TCTEX1D4Q5JR98 221 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 TEX30Q5JUR7 227 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 SLC36A1Q7Z2H8 476 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 TRPT1Q86TN4 253 aaKnown RBP3.33□□□□□ -1.88
VPS52-222ENST00000495981 NDUFA11Q86Y39 141 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 DYNAPQ8N1N2 210 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 SPERTQ8NA61 448 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 PROKR2Q8NFJ6 384 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 OR5AU1Q8NGC0 362 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 OR10Z1Q8NGY1 313 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 OR2T4Q8NH00 348 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 OR8S1Q8NH09 359 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 OR52J3Q8NH60 311 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 OR5K1Q8NHB7 308 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 OR5P3Q8WZ94 311 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 RPL3LQ92901 407 aaKnown RBP3.33□□□□□ -1.88
VPS52-222ENST00000495981 EMG1Q92979 244 aaKnown RBP3.33□□□□□ -1.88
VPS52-222ENST00000495981 SDSLQ96GA7 329 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 REEP6Q96HR9 211 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 LYZL4Q96KX0 146 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 C1QTNF4Q9BXJ3 329 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 NSRP1Q9H0G5 558 aaKnown RBP3.33□□□□□ -1.88
VPS52-222ENST00000495981 ARMC1Q9NVT9 282 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 SAMD4AQ9UPU9 718 aaKnown RBP3.33□□□□□ -1.88
VPS52-222ENST00000495981 TCF19Q9Y242 345 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 AP3M1Q9Y2T2 418 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 CAB39Q9Y376 341 aaPredicted RBP3.33□□□□□ -1.88
VPS52-222ENST00000495981 RHBDD3Q9Y3P4 386 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 DNAH6Q9C0G6 4158 aa3.33□□□□□ -1.88
VPS52-222ENST00000495981 A6NDX4 124 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 MFSD2BA6NFX1 497 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 FBLL1A6NHQ2 334 aaKnown RBP3.32□□□□□ -1.88
VPS52-222ENST00000495981 OR2AT4A6NND4 320 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 SLC1A7O00341 560 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 CDIPTO14735 213 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 NDUFB3O43676 98 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 ANGPTL7O43827 346 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 IDH3BO43837 385 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 CIDEAO60543 219 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 RHBDL1O75783 438 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 PAHP00439 452 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 CST4P01036 141 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 S100A6P06703 90 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 LYNP07948 512 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 HSD17B1P14061 328 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 CCL3L1P16619 93 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 DDOSTP39656 456 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 CEBPDP49716 269 aaPredicted RBP3.32□□□□□ -1.88
VPS52-222ENST00000495981 IL5RAQ01344 420 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 PRDX4Q13162 271 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 SPCS2Q15005 226 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 LY6EQ16553 131 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 KCTD21Q4G0X4 260 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 LRRC10Q5BKY1 277 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 RPL13AP3Q6NVV1 102 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 ZNF562Q6V9R5 426 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 ASRGL1Q7L266 308 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 TRPM8Q7Z2W7 1104 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 DPY19L4Q7Z388 723 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 MKXQ8IYA7 352 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 LINC00518Q8N0U6 118 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 ZNRF1Q8ND25 227 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms