RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 UNKLQ9H9P5 680 aaKnown RBP11.05□□□□□ -0.64
PTPN7-217ENST00000495688 NDUFA6P56556 154 aa11.05□□□□□ -0.64
PTPN7-217ENST00000495688 RAB11AP62491 216 aa11.05□□□□□ -0.64
PTPN7-217ENST00000495688 HLA-DRB3P79483 266 aa11.05□□□□□ -0.64
PTPN7-217ENST00000495688 TLE1Q04724 770 aa11.05□□□□□ -0.64
PTPN7-217ENST00000495688 ZNF726P1Q15940 193 aa11.05□□□□□ -0.64
PTPN7-217ENST00000495688 TVP23CQ96ET8 276 aa11.05□□□□□ -0.64
PTPN7-217ENST00000495688 TTTY12Q9BZ98 90 aa11.05□□□□□ -0.64
PTPN7-217ENST00000495688 A0A1W2PR80 420 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 ANKRD30BLA7E2S9 258 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 SIRPB1O00241 398 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 SYNGR4O95473 234 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 IGKV1-5P01602 117 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 MMP9P14780 707 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 SELEP16581 610 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 HOXA6P31267 233 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 HOXA4Q00056 320 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-217ENST00000495688 TESK1Q15569 626 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 CDPF1Q6NVV7 123 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 HAPLN4Q86UW8 402 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 OR10V1Q8NGI7 309 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 IL22RA2Q969J5 263 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 TCEAL7Q9BRU2 100 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 DOK5Q9P104 306 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 WDR1O75083 606 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 CNOT4O95628 575 aaKnown RBP11.04□□□□□ -0.64
PTPN7-217ENST00000495688 GNG3P63215 75 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 RNPS1Q15287 305 aaKnown RBP11.04□□□□□ -0.64
PTPN7-217ENST00000495688 OR1C1Q15619 314 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 SPNS3Q6ZMD2 512 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 TMEM251Q8N6I4 163 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 OR51M1Q9H341 326 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 FOXJ2Q9P0K8 574 aa11.04□□□□□ -0.64
PTPN7-217ENST00000495688 A0A1B0GU03 582 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 LOC102723971A0A1B0GUV8 181 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 DEGS1O15121 323 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 CYB5BO43169 146 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 MT-CO3P00414 261 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 IFNA5P01569 189 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 PLP2Q04941 152 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 FAM209BQ5JX69 171 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 ABHD17BQ5VST6 288 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 FAM53AQ6NSI3 398 aaPredicted RBP11.03□□□□□ -0.64
PTPN7-217ENST00000495688 ZNF573Q86YE8 665 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 SNIP1Q8TAD8 396 aaKnown RBP11.03□□□□□ -0.64
PTPN7-217ENST00000495688 RBMXL1Q96E39 390 aaKnown RBP11.03□□□□□ -0.64
PTPN7-217ENST00000495688 GGACTQ9BVM4 153 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 KCNS2Q9ULS6 477 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 RBM7Q9Y580 266 aaKnown RBP11.03□□□□□ -0.64
PTPN7-217ENST00000495688 COL27A1Q8IZC6 1860 aaPredicted RBP11.03□□□□□ -0.64
PTPN7-217ENST00000495688 C9orf172C9J069 976 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 LAMTOR5O43504 91 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 SYNGR2O43760 224 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 TRGC2P03986 189 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 COX5BP10606 129 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 HOXA5P20719 270 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 OR8G1Q15617 311 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 ZNF585BQ52M93 769 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 KHDC3LQ587J8 217 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 PDZD11Q5EBL8 140 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 GFI1BQ5VTD9 330 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 FAM90A2PQ658T7 463 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 ZNF880Q6PDB4 577 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 WDR86Q86TI4 376 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 TMPRSS5Q9H3S3 457 aa11.03□□□□□ -0.64
PTPN7-217ENST00000495688 A0A087WWC5 75 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 A0A1W2PNU3 283 aaPredicted RBP11.02□□□□□ -0.64
PTPN7-217ENST00000495688 HIST1H2BKO60814 126 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 DFFBO76075 338 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 IL18BPO95998 194 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 HIST1H2BJP06899 126 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 HIST1H2BOP23527 126 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 HIST1H2BBP33778 126 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 CD200P41217 278 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 HIST1H2BDP58876 126 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 HIST1H2BCP62807 126 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 HIST2H2BEQ16778 126 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 PYY3Q5JQD4 70 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.02□□□□□ -0.64
PTPN7-217ENST00000495688 PEAR1Q5VY43 1037 aaPredicted RBP11.02□□□□□ -0.64
PTPN7-217ENST00000495688 Q6P435 159 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 HIST1H2BHQ93079 126 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 RAB40CQ96S21 281 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 HIST1H2BNQ99877 126 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 HIST1H2BMQ99879 126 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 TOLLIPQ9H0E2 274 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 OR51I2Q9H344 312 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 RIMS4Q9H426 269 aaPredicted RBP11.02□□□□□ -0.64
PTPN7-217ENST00000495688 PLK3Q9H4B4 646 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 PSENENQ9NZ42 101 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 B4GALT7Q9UBV7 327 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 KMT2EQ8IZD2 1858 aa11.02□□□□□ -0.64
PTPN7-217ENST00000495688 BDP1A6H8Y1 2624 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 IGHV2-70P01814 119 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 HBE1P02100 147 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 S100GP29377 79 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 APLNRP35414 380 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 ARR3P36575 388 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 GLIPR1P48060 266 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 CLN3Q13286 438 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms