RNA–Protein interactions for RNA: ENST00000495428.5

CMC1-211, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 608 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-211ENST00000495428 ZNF426Q9BUY5 554 aa0.69□□□□□ -2.3
CMC1-211ENST00000495428 C1QTNF6Q9BXI9 259 aa0.69□□□□□ -2.3
CMC1-211ENST00000495428 MRPL32Q9BYC8 188 aaKnown RBP0.69□□□□□ -2.3
CMC1-211ENST00000495428 C11orf49Q9H6J7 331 aa0.69□□□□□ -2.3
CMC1-211ENST00000495428 IFT46Q9NQC8 304 aa0.69□□□□□ -2.3
CMC1-211ENST00000495428 RBMX2Q9Y388 322 aaKnown RBP0.69□□□□□ -2.3
CMC1-211ENST00000495428 ABCA12Q86UK0 2595 aa0.69□□□□□ -2.3
CMC1-211ENST00000495428 SDK1Q7Z5N4 2213 aa0.69□□□□□ -2.3
CMC1-211ENST00000495428 ANKRD17O75179 2603 aaKnown RBP0.68□□□□□ -2.3
CMC1-211ENST00000495428 ATAD5Q96QE3 1844 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 ZNF638Q14966 1978 aaKnown RBP0.68□□□□□ -2.3
CMC1-211ENST00000495428 EPG5Q9HCE0 2579 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 ZNF292O60281 2723 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 IGLV3-9A0A075B6K5 115 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 PSMD11O00231 422 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 UBDO15205 165 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 LY6HO94772 140 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 CSTAP01040 98 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 IGHV3-30-3P0DP02 117 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 CD36P16671 472 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 RPA3P35244 121 aaPredicted RBP0.68□□□□□ -2.3
CMC1-211ENST00000495428 DYNLL1P63167 89 aaKnown RBP0.68□□□□□ -2.3
CMC1-211ENST00000495428 CD164Q04900 197 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 MRPL51Q4U2R6 128 aaKnown RBP0.68□□□□□ -2.3
CMC1-211ENST00000495428 CDRT4Q8N9R6 151 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 OR4X1Q8NH49 305 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 ANGPTL6Q8NI99 470 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 GTF2H4Q92759 462 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 LRRC39Q96DD0 335 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 NAP1L5Q96NT1 182 aaPredicted RBP0.68□□□□□ -2.3
CMC1-211ENST00000495428 ZNF471Q9BX82 626 aaPredicted RBP0.68□□□□□ -2.3
CMC1-211ENST00000495428 PECRQ9BY49 303 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 OR51E2Q9H255 320 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 HAUS4Q9H6D7 363 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 TXNL4BQ9NX01 149 aaKnown RBP0.68□□□□□ -2.3
CMC1-211ENST00000495428 PRO2289Q9P1D8 64 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 NXT1Q9UKK6 140 aaKnown RBP0.68□□□□□ -2.3
CMC1-211ENST00000495428 SCML1Q9UN30 329 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 BZW2Q9Y6E2 419 aaKnown RBP0.68□□□□□ -2.3
CMC1-211ENST00000495428 USH1CQ9Y6N9 552 aa0.68□□□□□ -2.3
CMC1-211ENST00000495428 ANKRD11Q6UB99 2663 aaPredicted RBP0.68□□□□□ -2.3
CMC1-211ENST00000495428 MYO9AB2RTY4 2548 aa0.67□□□□□ -2.3
CMC1-211ENST00000495428 LRRK2Q5S007 2527 aa0.67□□□□□ -2.3
CMC1-211ENST00000495428 IGHV3-73A0A0B4J1V6 119 aa0.67□□□□□ -2.3
CMC1-211ENST00000495428 B4DEV8 164 aa0.67□□□□□ -2.3
CMC1-211ENST00000495428 PSMA1P25786 263 aaKnown RBP0.67□□□□□ -2.3
CMC1-211ENST00000495428 UBE2KP61086 200 aa0.67□□□□□ -2.3
CMC1-211ENST00000495428 SKP2Q13309 424 aa0.67□□□□□ -2.3
CMC1-211ENST00000495428 TIMM23BQ5SRD1 257 aa0.67□□□□□ -2.3
CMC1-211ENST00000495428 SELENOHQ8IZQ5 122 aaKnown RBP0.67□□□□□ -2.3
CMC1-211ENST00000495428 OR11H1Q8NG94 326 aa0.67□□□□□ -2.3
CMC1-211ENST00000495428 OR5D18Q8NGL1 313 aa0.67□□□□□ -2.3
CMC1-211ENST00000495428 OR2Y1Q8NGV0 311 aa0.67□□□□□ -2.3
CMC1-211ENST00000495428 GALMQ96C23 342 aa0.67□□□□□ -2.3
CMC1-211ENST00000495428 TBX5Q99593 518 aa0.67□□□□□ -2.3
CMC1-211ENST00000495428 TIMM21Q9BVV7 248 aa0.67□□□□□ -2.3
CMC1-211ENST00000495428 PRRG3Q9BZD7 231 aa0.67□□□□□ -2.3
CMC1-211ENST00000495428 METTL17Q9H7H0 456 aaPredicted RBP0.67□□□□□ -2.3
CMC1-211ENST00000495428 FBXL3Q9UKT7 428 aa0.67□□□□□ -2.3
CMC1-211ENST00000495428 TTC28Q96AY4 2481 aa0.67□□□□□ -2.3
CMC1-211ENST00000495428 CHD6Q8TD26 2715 aa0.67□□□□□ -2.3
CMC1-211ENST00000495428 MYO18BQ8IUG5 2567 aa0.67□□□□□ -2.3
CMC1-211ENST00000495428 RAB3GAP2Q9H2M9 1393 aa0.67□□□□□ -2.3
CMC1-211ENST00000495428 DNMT1P26358 1616 aaKnown RBP0.67□□□□□ -2.3
CMC1-211ENST00000495428 FLNBO75369 2602 aaKnown RBP0.67□□□□□ -2.3
CMC1-211ENST00000495428 FLNAP21333 2647 aaKnown RBP0.67□□□□□ -2.3
CMC1-211ENST00000495428 COL6A6A6NMZ7 2263 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 IGKV1D-43A0A0B4J1Z2 117 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 A0A1B0GVG6 124 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 A0A1B0GW15 77 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 ARRDC5A6NEK1 342 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 C9J4A7 227 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 TNRC18O15417 2968 aaPredicted RBP0.66□□□□□ -2.3
CMC1-211ENST00000495428 CDK14O94921 469 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 GPX1P07203 203 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 CTSEP14091 401 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 PPP1CCP36873 323 aaKnown RBP0.66□□□□□ -2.3
CMC1-211ENST00000495428 OR10A3P58181 314 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 GABARAPL2P60520 117 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 VAMP3Q15836 100 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 C2orf91Q6ZV80 131 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 OR4X2Q8NGF9 303 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 OR10A6Q8NH74 314 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 FAM45AQ8TCE6 357 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 GLT1D1Q96MS3 346 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 EBNA1BP2Q99848 306 aaKnown RBP0.66□□□□□ -2.3
CMC1-211ENST00000495428 C11orf1Q9H5F2 150 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 SNX24Q9Y343 169 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 A0A0C4DFX4 3053 aa0.66□□□□□ -2.3
CMC1-211ENST00000495428 DENND4BO75064 1496 aaPredicted RBP0.66□□□□□ -2.3
CMC1-211ENST00000495428 NYNRINQ9P2P1 1898 aaKnown RBP0.65□□□□□ -2.3
CMC1-211ENST00000495428 C11orf86A6NJI1 115 aa0.65□□□□□ -2.31
CMC1-211ENST00000495428 BOLA2-SMG1P6H3BVE0 249 aa0.65□□□□□ -2.31
CMC1-211ENST00000495428 NAPSAO96009 420 aa0.65□□□□□ -2.31
CMC1-211ENST00000495428 CD200P41217 278 aa0.65□□□□□ -2.31
CMC1-211ENST00000495428 EMP2P54851 167 aa0.65□□□□□ -2.31
CMC1-211ENST00000495428 TSPAN5P62079 268 aa0.65□□□□□ -2.31
CMC1-211ENST00000495428 VSNL1P62760 191 aa0.65□□□□□ -2.31
CMC1-211ENST00000495428 C18orf21Q32NC0 220 aaPredicted RBP0.65□□□□□ -2.31
CMC1-211ENST00000495428 HENMT1Q5T8I9 393 aaKnown RBP0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms